Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 Y_RNA.464-201ENST00000384282 110 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-378P-201ENST00000384324 107 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA46.1-201ENST00000391069 153 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 MIR208B-201ENST00000401172 77 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-651P-201ENST00000411040 105 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC005042.3-201ENST00000453230 174 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORD2.1-201ENST00000458762 69 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-625P-201ENST00000459412 107 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORD116-28-201ENST00000516123 91 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC025281.1-201ENST00000567026 265 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 Z83818.1-201ENST00000603584 150 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNRPGP20-201ENST00000604477 205 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC006001.4-201ENST00000622243 395 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC092628.2-201ENST00000622492 339 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.9
CDC42EP3Q9UKI2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDC42EP3Q9UKI2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 MIR549A-201ENST00000385268 96 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 MIR548M-201ENST00000408260 86 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 MIR320B2-201ENST00000408479 138 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1199P-201ENST00000411249 104 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 SETP5-201ENST00000437270 562 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 POLR2KP2-201ENST00000438155 177 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 IFNA11P-201ENST00000446352 526 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 UQCRBP2-201ENST00000447827 297 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RPL23AP3-201ENST00000453844 468 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RN7SL330P-201ENST00000469709 307 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RPL23AP70-201ENST00000483361 460 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-966P-201ENST00000516479 104 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1212P-201ENST00000517023 104 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 MIR3651-201ENST00000630427 90 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 CEP170P1-201ENST00000502249 4587 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 AC135776.4-201ENST00000624300 1904 ntBASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDC42EP3Q9UKI2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RNU4-15P-201ENST00000362613 141 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.101-201ENST00000363154 102 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RNA5SP267-201ENST00000364893 126 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-514P-201ENST00000384208 107 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.498-201ENST00000384460 102 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RNU2-61P-201ENST00000411069 191 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RAB28P5-201ENST00000427490 651 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 MRPS10P1-201ENST00000448483 130 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 BX510359.1-201ENST00000456973 237 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AC107393.1-201ENST00000512403 346 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 RN7SKP57-201ENST00000517248 293 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AC093331.1-201ENST00000521474 169 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AL137100.2-201ENST00000555786 315 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AC026470.2-201ENST00000561492 181 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 MIR3124-201ENST00000582636 67 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AC006111.3-201ENST00000622137 383 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDC42EP3Q9UKI2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-682P-201ENST00000363843 106 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.217-201ENST00000364214 105 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 SNORA18.3-201ENST00000384122 132 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1310P-201ENST00000384153 107 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 MIR147B-201ENST00000390185 80 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms