Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AL391516.1-201ENST00000554380 2449 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNU6-312P-201ENST00000364629 107 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNU6-281P-201ENST00000384212 103 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MIR329-1-201ENST00000385028 80 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 SNORA48.5-201ENST00000391143 135 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RAB28P5-201ENST00000427490 651 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MTND4LP9-201ENST00000427694 174 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNU7-170P-201ENST00000459303 61 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AL391261.3-201ENST00000557194 520 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MIR5004-201ENST00000579078 107 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MIR5695-201ENST00000579717 85 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MIR3690-201ENST00000580266 75 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 MIR3145-201ENST00000580727 82 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AL359881.1-201ENST00000602916 267 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 AL645944.1-201ENST00000603857 493 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.39□□□□□ -1.87
SMPD4Q9NXE4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RNU4-80P-201ENST00000363200 141 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RNU6-105P-201ENST00000363909 104 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RNU6-741P-201ENST00000383889 107 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 SNORD116-14-201ENST00000383894 92 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 SNORD116-17-201ENST00000383929 92 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 SNORD116-15-201ENST00000384445 92 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 SNORD116-20-201ENST00000384529 92 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 SNORD116-19-201ENST00000384729 92 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 MIR153-2-201ENST00000385225 87 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RPL23AP82-202ENST00000427528 469 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 WARS2P1-201ENST00000429678 537 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AL137159.1-201ENST00000452808 512 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC092798.1-201ENST00000458542 409 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RN7SL863P-201ENST00000462370 296 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RPL23AP62-201ENST00000463396 453 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 RPS27AP9-201ENST00000477681 438 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 DEFB131C-201ENST00000528817 165 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AL162274.2-201ENST00000614406 332 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AL357075.2-201ENST00000614906 189 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC005296.1-201ENST00000616145 209 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC241585.2-209ENST00000638217 143 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 AC093908.1-201ENST00000623125 8092 ntBASIC3.38□□□□□ -1.87
SMPD4Q9NXE4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.230-201ENST00000364348 109 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 U8.10-201ENST00000384260 133 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 SNORA20-201ENST00000384662 132 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 SNORA40-201ENST00000388090 126 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNU6-837P-201ENST00000391056 108 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AC007560.1-201ENST00000426912 237 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RPS15AP5-201ENST00000436276 388 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNU4-57P-201ENST00000515980 135 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms