Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 RNU5F-4P-201ENST00000516581 114 ntBASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 AL078604.3-201ENST00000615580 211 ntBASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 AC090517.3-201ENST00000625170 141 ntBASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 U6.115-201ENST00000636045 103 ntBASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VRTNQ9H8Y1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 RNA5SP97-201ENST00000365006 84 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 MIR586-201ENST00000385035 97 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 RBMY2UP-201ENST00000453474 324 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 RNU7-200P-201ENST00000516105 62 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 SUMO2P18-201ENST00000518873 252 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 CYCSP30-201ENST00000546447 172 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 MIR4644-201ENST00000579929 84 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 AL354798.1-201ENST00000622505 329 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 ZNF962P-201ENST00000443465 3140 ntBASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.16□□□□□ -1.74
VRTNQ9H8Y1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VRTNQ9H8Y1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
VRTNQ9H8Y1 Y_RNA.441-201ENST00000384123 112 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 SNORA3.3-201ENST00000408712 125 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 SNORA11-201ENST00000408789 128 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AL451074.5-201ENST00000415894 435 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 RNU6-1098P-201ENST00000516772 96 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AC108706.1-201ENST00000611053 297 ntBASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VRTNQ9H8Y1 AC010329.5-201ENST00000623497 2174 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.238-201ENST00000364441 102 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AL139281.1-201ENST00000422120 335 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 SEM1P1-201ENST00000506694 209 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 RNU6-346P-201ENST00000516288 111 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 SCARNA14-201ENST00000516903 136 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 MTND5P41-201ENST00000517498 206 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AC090877.1-201ENST00000561418 344 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AC084757.4-201ENST00000616350 526 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 AC132825.6-201ENST00000638861 357 ntBASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRTNQ9H8Y1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.287-201ENST00000364853 94 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 SNORA51.4-201ENST00000364993 124 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 RNU4-17P-201ENST00000365598 141 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 TMSB4XP3-201ENST00000445144 114 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 RPS20P10-201ENST00000451209 253 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 RN7SL323P-201ENST00000494712 295 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 AC013791.1-201ENST00000616619 62 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 MIR7515-201ENST00000637837 67 ntBASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRTNQ9H8Y1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.398-201ENST00000383952 99 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 MIR613-201ENST00000385248 95 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 SNORA26.5-201ENST00000391215 123 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 MIR1294-201ENST00000408503 142 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 RNU2-2P-201ENST00000410396 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms