Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SUMO1P3-201ENST00000439961 304 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 HSPE1P25-201ENST00000455484 251 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 snoU13.6-201ENST00000458785 104 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU7-170P-201ENST00000459303 61 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RPL23AP62-201ENST00000463396 453 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RN7SKP49-201ENST00000516675 260 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AL365434.2-201ENST00000607979 234 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.12□□□□□ -1.91
NDC1Q9BTX1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.117-201ENST00000363294 101 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 RNU6-137P-201ENST00000363680 108 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.269-201ENST00000364685 89 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.462-201ENST00000384268 102 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AL133475.1-201ENST00000404414 305 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 SNORA11.2-201ENST00000408318 127 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AC109925.1-201ENST00000478069 331 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 RPS15AP11-201ENST00000594193 385 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AL391813.1-201ENST00000603098 260 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 BX284668.6-201ENST00000606899 438 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 AC098479.1-201ENST00000609225 154 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.11□□□□□ -1.91
NDC1Q9BTX1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDC1Q9BTX1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNU4-90P-201ENST00000362773 141 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNY1-201ENST00000364228 113 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNU6-290P-201ENST00000365212 101 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.785-201ENST00000384290 109 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 MIR329-1-201ENST00000385028 80 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 MIR767-201ENST00000390228 109 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SNORA26.3-201ENST00000391119 136 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SNORA48.5-201ENST00000391143 135 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AL358075.3-201ENST00000426289 226 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SETP5-201ENST00000437270 562 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 Z75741.1-201ENST00000446793 314 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AP000705.1-201ENST00000454567 350 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SNORA59A-201ENST00000459326 152 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RPL26P26-201ENST00000480251 434 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RN7SL504P-201ENST00000494496 287 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 SERF1AP1-201ENST00000514575 187 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNU4-71P-201ENST00000516258 113 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNU6-567P-201ENST00000516746 107 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 MIR4643-201ENST00000577473 78 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AL138963.2-201ENST00000605137 226 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.1□□□□□ -1.91
NDC1Q9BTX1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.1□□□□□ -1.91
NDC1Q9BTX1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORD114-19-201ENST00000363072 75 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORD115-8-201ENST00000363856 82 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORA14A-201ENST00000364773 135 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.286-201ENST00000364813 102 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORD115-38-201ENST00000365037 82 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 RNU4-30P-201ENST00000410245 143 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 CYCSP48-201ENST00000417124 323 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AC012306.1-201ENST00000423267 114 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AC019205.3-201ENST00000424573 156 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 PIGPP3-201ENST00000425307 415 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 RNU6-182P-201ENST00000516970 105 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SNORA81.3-201ENST00000517283 198 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 MIR5004-201ENST00000579078 107 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.09□□□□□ -1.91
NDC1Q9BTX1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
NDC1Q9BTX1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms