Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MTND3P9-201ENST00000429526 346 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RPEP5-201ENST00000441137 268 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 SNORD53-201ENST00000579969 78 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RPS15AP11-201ENST00000594193 385 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AP000560.1-201ENST00000624150 1937 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 SNORD27-201ENST00000363981 72 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 RNU6-142P-201ENST00000384019 107 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 MIR544A-201ENST00000384855 91 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 MIR548M-201ENST00000408260 86 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.592-201ENST00000410274 109 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AL513328.1-201ENST00000446460 224 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AC098869.1-201ENST00000481627 292 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AP001025.1-201ENST00000486139 332 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 RNU6-406P-201ENST00000516470 107 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 RNU6-182P-201ENST00000516970 105 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AC016256.1-201ENST00000547971 354 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 AP001282.2-201ENST00000616149 309 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 IPO8P1-201ENST00000455509 3109 ntBASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN3Q9BTN0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC009541.1-201ENST00000438279 2662 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNU1-35P-201ENST00000362782 153 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNA5SP99-201ENST00000364020 114 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNU6-338P-201ENST00000383888 105 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.785-201ENST00000384290 109 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.466-201ENST00000384294 113 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.539-201ENST00000384635 107 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 MIR184-201ENST00000384962 84 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNU6-700P-201ENST00000391043 107 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNU6-1203P-201ENST00000410703 110 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RNU2-25P-201ENST00000411041 191 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 PIGPP3-201ENST00000425307 415 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC011742.1-201ENST00000431448 434 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC004383.1-201ENST00000438135 289 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RPS29P27-201ENST00000463711 170 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 RPL31P41-201ENST00000477967 372 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC073410.2-201ENST00000603240 332 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AL133393.1-201ENST00000603277 287 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AL109809.4-201ENST00000603520 2185 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC009779.6-201ENST00000603972 165 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC244205.2-202ENST00000635781 342 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 MTND5P9-201ENST00000503854 1755 ntBASIC3.23□□□□□ -1.89
LRFN3Q9BTN0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AC092435.3-201ENST00000565538 3654 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AL359854.1-201ENST00000614203 1594 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RNU1-76P-201ENST00000362903 159 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.84-201ENST00000363011 104 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 MIR548H3-201ENST00000408771 118 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RNA5SP494-201ENST00000410653 129 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RNU2-14P-201ENST00000411053 191 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AC078809.1-201ENST00000427601 140 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RPL39P29-201ENST00000447779 157 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RPL36AP48-201ENST00000485521 314 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AL137100.2-201ENST00000555786 315 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AC008739.2-201ENST00000597006 317 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 AC010900.2-201ENST00000604508 210 ntBASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN3Q9BTN0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.21□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.118-201ENST00000363300 101 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.462-201ENST00000384268 102 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.555-201ENST00000384673 110 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 MIR215-201ENST00000384858 110 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 CYCSP48-201ENST00000417124 323 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 AP001324.2-201ENST00000461163 319 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms