Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.9
HIST1H2AJQ99878 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H2AJQ99878 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H2AJQ99878 AL391987.6-201ENST00000305671 199 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 RNU1-57P-201ENST00000384491 166 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC139712.2-201ENST00000424302 339 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 Z98742.2-201ENST00000431564 187 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 SNORA40.9-201ENST00000515895 93 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 RNU6-1338P-201ENST00000516328 91 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 RRN3P3-201ENST00000549207 578 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC010900.2-201ENST00000604508 210 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H2AJQ99878 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 BX322639.1-202ENST00000423987 2213 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNU6-655P-201ENST00000362858 107 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 SNORA20.1-201ENST00000364790 130 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNU6-1026P-201ENST00000384465 108 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 MT-TR-201ENST00000387439 65 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNU4-30P-201ENST00000410245 143 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNA5SP201-201ENST00000410316 124 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 RNU6-496P-201ENST00000516145 99 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 MZT1P2-201ENST00000604387 248 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H2AJQ99878 snoU2_19.1-201ENST00000362361 80 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 RNU6-626P-201ENST00000363354 107 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.595-201ENST00000410403 105 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 AC006028.1-201ENST00000438379 402 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 HSPE1P25-201ENST00000455484 251 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 AC073901.1-201ENST00000462471 408 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 SCARNA24.2-201ENST00000516968 130 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 PCGEM1.1-201ENST00000613431 131 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 MTND5P35-201ENST00000557537 1720 ntBASIC3.13□□□□□ -1.91
HIST1H2AJQ99878 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 MIR335-201ENST00000362173 94 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SNORD81.1-201ENST00000363064 77 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.179-201ENST00000363844 90 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SNORD27-201ENST00000363981 72 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.286-201ENST00000364813 102 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 RNU6-20P-201ENST00000384106 107 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SNORD63-201ENST00000384262 68 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.552-201ENST00000384665 112 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 MIR591-201ENST00000385290 95 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AC091179.3-201ENST00000474761 144 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 RPL21P129-201ENST00000491732 478 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AC145146.1-201ENST00000496370 254 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 HMGB3P17-201ENST00000504195 649 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.683-201ENST00000516508 93 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms