Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 ATP5J2P3-201ENST00000451550 258 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC47Q96A33 RPL9P9-202ENST00000466501 579 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 RPL39P5-202ENST00000512505 151 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC010493.1-201ENST00000513479 292 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC090115.3-201ENST00000553218 849 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC004223.2-201ENST00000590309 544 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 RPL17P51-201ENST00000605218 238 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 PRR13P7-201ENST00000605538 430 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AL136221.1-201ENST00000621449 509 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC005609.4-201ENST00000625071 447 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC47Q96A33 AC009541.1-201ENST00000438279 2662 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CCDC47Q96A33 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC47Q96A33 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC47Q96A33 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC47Q96A33 AC099677.2-201ENST00000436385 175 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 AC073415.1-201ENST00000449240 153 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 AMD1P1-201ENST00000457220 922 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 RNU7-138P-201ENST00000459479 64 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 AC010531.2-201ENST00000465012 153 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 ARL2BPP4-201ENST00000506854 471 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 SNORD60.2-201ENST00000516883 86 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 MTND4P7-201ENST00000523876 130 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 AP003034.1-201ENST00000534621 422 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC47Q96A33 SNORA59B-202ENST00000578183 701 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 AP001485.1-201ENST00000604799 199 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 HULC.1-201ENST00000612720 240 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.69□□□□□ -2.14
CCDC47Q96A33 RNU6-862P-201ENST00000362804 105 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 RNU5A-6P-201ENST00000384136 116 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 MIR520A-201ENST00000384862 85 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 RNA5SP219-201ENST00000390940 113 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 SNORA67.6-201ENST00000391093 99 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 RNU6-1093P-201ENST00000391194 107 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AL606923.1-201ENST00000406616 190 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AC092447.3-201ENST00000426027 686 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AC073464.1-201ENST00000429823 534 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AL121601.2-201ENST00000438019 707 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC47Q96A33 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC47Q96A33 snoU13.26-201ENST00000459452 105 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 CCDC34P1-201ENST00000507441 517 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 Y_RNA.695-201ENST00000516715 107 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC47Q96A33 AP005136.1-201ENST00000579765 429 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC47Q96A33 AC087752.4-201ENST00000605911 462 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AC063944.3-201ENST00000609969 533 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 AL354950.2-201ENST00000617939 290 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 MTND5P10-201ENST00000603719 1809 ntBASIC1.68□□□□□ -2.14
CCDC47Q96A33 Y_RNA.132-201ENST00000363421 102 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 RNU2-7P-201ENST00000410794 178 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC47Q96A33 EBAG9P1-201ENST00000418955 543 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 USP9YP28-201ENST00000435142 589 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 snoU13.30-201ENST00000458951 104 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 RPL36AP21-201ENST00000490372 323 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC47Q96A33 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.67□□□□□ -2.14
CCDC47Q96A33 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC47Q96A33 RNU6-271P-201ENST00000363858 105 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 SNORA18.2-201ENST00000383865 132 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 RNU6-877P-201ENST00000383868 107 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC47Q96A33 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC47Q96A33 snoU13.6-201ENST00000458785 104 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 RPL26P26-201ENST00000480251 434 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 BET1P1-201ENST00000482276 359 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 RNU6-612P-201ENST00000516909 102 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC47Q96A33 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC47Q96A33 AC027807.1-201ENST00000559921 996 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AL158827.2-201ENST00000602494 330 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AL391646.1-201ENST00000603860 190 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AL158063.1-201ENST00000615349 536 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 AL691447.3-201ENST00000635020 330 ntBASIC1.66□□□□□ -2.14
CCDC47Q96A33 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CCDC47Q96A33 AC010615.1-201ENST00000594254 1764 ntBASIC1.65□□□□□ -2.14
CCDC47Q96A33 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms