Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNA5SP332-201ENST00000391063 115 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC008267.6-201ENST00000441664 139 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 ABCF2P2-201ENST00000450549 296 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-453P-201ENST00000516819 85 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AL160290.3-201ENST00000604869 165 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 MIR548AY-201ENST00000617669 107 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 Z82209.1-201ENST00000422141 2135 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-1290P-201ENST00000362957 109 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 SNORD113.2-201ENST00000364166 89 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 Y_RNA.229-201ENST00000364347 113 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-818P-201ENST00000364837 108 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU4-11P-201ENST00000365287 132 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNY3P5-201ENST00000384127 102 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 AC012671.1-201ENST00000451912 203 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU7-57P-201ENST00000459540 60 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-221P-201ENST00000459541 99 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 AC083906.5-201ENST00000503722 328 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 RNU7-115P-201ENST00000516433 55 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 SCARNA11.3-201ENST00000517276 130 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 snoZ196.1-201ENST00000625269 89 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 U3.53-201ENST00000628922 216 ntBASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DEPDC4Q8N2C3 CPHL1P-201ENST00000461341 3407 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 SNORA27.1-201ENST00000362604 124 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 SNORA20B-201ENST00000384220 132 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 SNORA22C-201ENST00000384614 134 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 RNA5SP397-201ENST00000391323 118 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AL355796.1-201ENST00000406706 323 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AL121890.1-201ENST00000435457 205 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 HSPE1P21-201ENST00000438283 308 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC245047.8-201ENST00000456455 284 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 RNU7-14P-201ENST00000459331 62 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC010598.1-201ENST00000510378 103 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC018630.3-201ENST00000542637 96 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 TVP23BP1-201ENST00000557500 617 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AP003357.1-201ENST00000604497 148 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 AC090517.3-201ENST00000625170 141 ntBASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
DEPDC4Q8N2C3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 MAPK10-322ENST00000641485 4530 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 U8.7-201ENST00000364940 136 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-643P-201ENST00000384018 107 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 SNORA70F-201ENST00000384142 135 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-975P-201ENST00000384296 105 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 MIR1183-201ENST00000408856 89 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-735P-201ENST00000410612 107 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 MIR1911-201ENST00000410783 80 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 Y_RNA.629-201ENST00000411368 105 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RPL23AP58-201ENST00000440453 469 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 AL121914.1-201ENST00000450188 156 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RPS26P55-201ENST00000471178 356 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RN7SKP21-201ENST00000516503 220 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RNU7-116P-201ENST00000516940 62 ntBASIC4.04□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-711P-201ENST00000517255 106 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms