Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU6-918P-201ENST00000391219 106 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU2-61P-201ENST00000411069 191 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 UQCRBP2-201ENST00000447827 297 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RPL23AP70-201ENST00000483361 460 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU7-110P-201ENST00000516891 62 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 MRPS18CP4-201ENST00000535821 231 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 MIR4282-201ENST00000583613 67 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RPL30P11-203ENST00000598995 310 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RPL17P51-201ENST00000605218 238 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 AP000553.6-201ENST00000641242 118 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS4Q8IUM7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS4Q8IUM7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS4Q8IUM7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS4Q8IUM7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC010329.5-201ENST00000623497 2174 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 RNU4-15P-201ENST00000362613 141 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.275-201ENST00000364726 110 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.398-201ENST00000383952 99 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 MIR490-201ENST00000384865 128 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 SNORA46.1-201ENST00000391069 153 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 RNU6-394P-201ENST00000410735 107 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP146-201ENST00000410743 123 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.638-201ENST00000459374 113 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC103975.1-201ENST00000482506 483 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC074133.1-201ENST00000515696 183 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC090877.1-201ENST00000561418 344 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC005562.2-201ENST00000618264 111 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 AC002064.3-201ENST00000623448 346 ntBASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS4Q8IUM7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 MTND5P35-201ENST00000557537 1720 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 LINC02471-203ENST00000641941 4752 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 SNORA25.1-201ENST00000362326 128 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.240-201ENST00000364469 95 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.304-201ENST00000365011 112 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 SNORD50.2-201ENST00000365465 70 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 RNU6-21P-201ENST00000384710 107 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 AC010095.1-201ENST00000443543 144 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 AC091179.1-201ENST00000461606 579 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 RN7SL601P-201ENST00000471221 293 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 SNORA40.9-201ENST00000515895 93 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 AP001485.1-201ENST00000604799 199 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 MIR7851-201ENST00000610611 160 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS4Q8IUM7 MFSD8-236ENST00000641509 4050 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.230-201ENST00000364348 109 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 RNU6-81P-201ENST00000365608 104 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 RPL19P1-201ENST00000411635 428 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 ARF4P2-201ENST00000430209 526 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 AC073901.1-201ENST00000462471 408 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 AC117440.1-201ENST00000474107 571 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 AC090517.3-201ENST00000625170 141 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 AC058791.1-201ENST00000608412 3198 ntBASIC3.97□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.446-201ENST00000384178 104 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 U3.39-201ENST00000408569 239 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1135P-201ENST00000411083 103 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 RBMY2UP-201ENST00000453474 324 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 RPL26P26-201ENST00000480251 434 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AC091959.1-201ENST00000495857 238 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms