Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 HMGN2P9-201ENST00000476875 229 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 AC091167.1-201ENST00000492017 396 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 MRPS17P9-201ENST00000511924 393 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 AC073413.2-201ENST00000604332 360 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARS2Q5ST30 AC025031.4-201ENST00000621248 3271 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARS2Q5ST30 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 Y_RNA.95-201ENST00000363079 95 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 RNU6-733P-201ENST00000410759 104 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 AC009414.1-201ENST00000427200 443 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 RPL23AP93-201ENST00000440847 484 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 AC004223.1-201ENST00000479840 271 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 AC145146.1-201ENST00000496370 254 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 AC015795.1-201ENST00000513669 327 ntBASIC4.88□□□□□ -1.63
VARS2Q5ST30 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARS2Q5ST30 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VARS2Q5ST30 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VARS2Q5ST30 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 AL592437.2-201ENST00000421655 2434 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNU6-633P-201ENST00000362612 103 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 Y_RNA.155-201ENST00000363632 101 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 SNORA51.4-201ENST00000364993 124 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNA5SP171-201ENST00000391071 115 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 SDHCP2-201ENST00000398565 501 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNU4-37P-201ENST00000410214 84 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 CYCSP19-201ENST00000411715 316 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 AL356387.2-201ENST00000422272 243 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 RPS4XP11-201ENST00000446897 772 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 HMGN2P10-201ENST00000448085 265 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 AL049873.1-201ENST00000480540 376 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RPS27AP10-201ENST00000496103 208 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNU6-539P-201ENST00000516665 103 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RN7SKP282-201ENST00000516824 299 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 RNU7-172P-201ENST00000517125 64 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 IGLVIV-65-201ENST00000517313 360 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 JPX_2.1-201ENST00000614161 69 ntBASIC4.87□□□□□ -1.63
VARS2Q5ST30 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.87□□□□□ -1.63
VARS2Q5ST30 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VARS2Q5ST30 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARS2Q5ST30 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 RNU6-363P-201ENST00000362895 105 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 RNU6-884P-201ENST00000363889 107 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 MIR1271-201ENST00000408537 86 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 AC125388.1-201ENST00000459631 156 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 RNU6-693P-201ENST00000516134 107 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 MIR3618-201ENST00000580330 88 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 RN7SL435P-201ENST00000584418 282 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 U7.4-201ENST00000614961 63 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 AC087741.2-201ENST00000619415 172 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARS2Q5ST30 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
VARS2Q5ST30 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARS2Q5ST30 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.86□□□□□ -1.63
VARS2Q5ST30 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.85□□□□□ -1.63
VARS2Q5ST30 AP000542.2-201ENST00000623199 6179 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 AC005332.5-201ENST00000591222 2919 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VARS2Q5ST30 Y_RNA.40-201ENST00000362645 93 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 SNORD116-10-201ENST00000363791 102 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 RN7SKP156-201ENST00000410308 342 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 RNA5SP360-201ENST00000516555 118 ntBASIC4.85□□□□□ -1.63
VARS2Q5ST30 RNU4-60P-201ENST00000517239 135 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms