Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PER3P56645 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PER3P56645 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
PER3P56645 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PER3P56645 RNU6-1159P-201ENST00000362933 107 ntBASIC3.09□□□□□ -1.91
PER3P56645 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
PER3P56645 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
PER3P56645 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
PER3P56645 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
PER3P56645 RPL21P38-201ENST00000418090 167 ntBASIC3.09□□□□□ -1.91
PER3P56645 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.09□□□□□ -1.91
PER3P56645 Z98742.2-201ENST00000431564 187 ntBASIC3.09□□□□□ -1.91
PER3P56645 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.09□□□□□ -1.91
PER3P56645 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
PER3P56645 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
PER3P56645 RN7SL594P-201ENST00000470590 287 ntBASIC3.09□□□□□ -1.91
PER3P56645 AL121594.1-201ENST00000475906 575 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC021205.2-201ENST00000480069 347 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC098869.1-201ENST00000481627 292 ntBASIC3.09□□□□□ -1.91
PER3P56645 RPL36AP48-201ENST00000485521 314 ntBASIC3.09□□□□□ -1.91
PER3P56645 MTND4LP22-201ENST00000508209 276 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC025465.3-201ENST00000510570 311 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
PER3P56645 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
PER3P56645 MRPS36P2-201ENST00000512569 299 ntBASIC3.09□□□□□ -1.91
PER3P56645 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
PER3P56645 SNORA40.15-201ENST00000516884 107 ntBASIC3.09□□□□□ -1.91
PER3P56645 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PER3P56645 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
PER3P56645 EIF4BP1-201ENST00000554881 351 ntBASIC3.09□□□□□ -1.91
PER3P56645 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.09□□□□□ -1.91
PER3P56645 AC136932.1-201ENST00000574771 208 ntBASIC3.09□□□□□ -1.91
PER3P56645 MIR5695-201ENST00000579717 85 ntBASIC3.09□□□□□ -1.91
PER3P56645 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
PER3P56645 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.09□□□□□ -1.91
PER3P56645 AC011476.5-201ENST00000615594 130 ntBASIC3.09□□□□□ -1.91
PER3P56645 UCA1.1-201ENST00000620952 75 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC130454.1-201ENST00000622948 401 ntBASIC3.09□□□□□ -1.91
PER3P56645 AC009487.2-201ENST00000420969 6821 ntBASIC3.09□□□□□ -1.91
PER3P56645 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.09□□□□□ -1.92
PER3P56645 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
PER3P56645 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
PER3P56645 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 RNU4-15P-201ENST00000362613 141 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNA5SP42-201ENST00000364278 115 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNU6-879P-201ENST00000364328 108 ntBASIC3.08□□□□□ -1.92
PER3P56645 Y_RNA.376-201ENST00000365638 108 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNU6-378P-201ENST00000384324 107 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNU1-57P-201ENST00000384491 166 ntBASIC3.08□□□□□ -1.92
PER3P56645 Y_RNA.556-201ENST00000384677 113 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
PER3P56645 AL079342.1-201ENST00000401460 267 ntBASIC3.08□□□□□ -1.92
PER3P56645 CBX3P9-201ENST00000402326 552 ntBASIC3.08□□□□□ -1.92
PER3P56645 MIR1289-1-201ENST00000408836 144 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNA5SP201-201ENST00000410316 124 ntBASIC3.08□□□□□ -1.92
PER3P56645 RNU6-1001P-201ENST00000411265 100 ntBASIC3.08□□□□□ -1.92
PER3P56645 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
PER3P56645 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.08□□□□□ -1.92
PER3P56645 AC007215.1-201ENST00000464893 276 ntBASIC3.08□□□□□ -1.92
PER3P56645 S100A11P2-201ENST00000467589 312 ntBASIC3.08□□□□□ -1.92
PER3P56645 RN7SL504P-201ENST00000494496 287 ntBASIC3.08□□□□□ -1.92
PER3P56645 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.08□□□□□ -1.92
PER3P56645 RNU6-567P-201ENST00000516746 107 ntBASIC3.08□□□□□ -1.92
PER3P56645 AC023824.2-201ENST00000566185 400 ntBASIC3.08□□□□□ -1.92
PER3P56645 MIR4659A-201ENST00000580269 81 ntBASIC3.08□□□□□ -1.92
PER3P56645 AC073410.2-201ENST00000603240 332 ntBASIC3.08□□□□□ -1.92
PER3P56645 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.08□□□□□ -1.92
PER3P56645 AC005296.1-201ENST00000616145 209 ntBASIC3.08□□□□□ -1.92
PER3P56645 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
PER3P56645 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
PER3P56645 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PER3P56645 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
PER3P56645 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.08□□□□□ -1.92
PER3P56645 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PER3P56645 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PER3P56645 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PER3P56645 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
PER3P56645 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.07□□□□□ -1.92
PER3P56645 Y_RNA.483-201ENST00000384380 101 ntBASIC3.07□□□□□ -1.92
PER3P56645 MIR329-1-201ENST00000385028 80 ntBASIC3.07□□□□□ -1.92
PER3P56645 SNORD78.2-201ENST00000391076 69 ntBASIC3.07□□□□□ -1.92
PER3P56645 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.07□□□□□ -1.92
PER3P56645 ARL5AP4-201ENST00000430731 512 ntBASIC3.07□□□□□ -1.92
PER3P56645 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.07□□□□□ -1.92
PER3P56645 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.07□□□□□ -1.92
PER3P56645 AC006483.1-201ENST00000487308 313 ntBASIC3.07□□□□□ -1.92
PER3P56645 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.07□□□□□ -1.92
PER3P56645 RNU6-408P-201ENST00000515910 100 ntBASIC3.07□□□□□ -1.92
PER3P56645 RNU6-1143P-201ENST00000516125 104 ntBASIC3.07□□□□□ -1.92
PER3P56645 MIR2276-201ENST00000516886 89 ntBASIC3.07□□□□□ -1.92
PER3P56645 RNU6-1198P-201ENST00000516904 67 ntBASIC3.07□□□□□ -1.92
PER3P56645 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
PER3P56645 AP006245.1-201ENST00000522549 120 ntBASIC3.07□□□□□ -1.92
PER3P56645 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.07□□□□□ -1.92
PER3P56645 AP003733.2-201ENST00000529409 171 ntBASIC3.07□□□□□ -1.92
PER3P56645 AC093023.1-201ENST00000547375 507 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms