Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.38□□□□□ -2.19
CXCL12P48061 AC010975.2-201ENST00000427781 588 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL12P48061 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CXCL12P48061 AK3P2-201ENST00000507976 429 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL12P48061 PTP4A1P4-201ENST00000512479 322 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 MTND3P5-201ENST00000512798 333 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 RNA5SP480-201ENST00000516840 109 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL12P48061 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.38□□□□□ -2.19
CXCL12P48061 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL12P48061 AC010928.2-201ENST00000588017 287 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AC004223.2-201ENST00000590309 544 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 AC012507.3-201ENST00000603556 477 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 RNU6-85P-201ENST00000605989 107 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 U2.17-201ENST00000611454 95 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 HULC.1-201ENST00000612720 240 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CXCL12P48061 uc_338.34-201ENST00000617467 174 ntBASIC1.38□□□□□ -2.19
CXCL12P48061 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL12P48061 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL12P48061 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CXCL12P48061 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CXCL12P48061 SNORD32A-201ENST00000364805 84 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CXCL12P48061 Y_RNA.409-201ENST00000383990 98 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 SNORA12-201ENST00000391162 147 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 RPS29P13-201ENST00000402041 169 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 MIR1283-2-201ENST00000408621 87 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CXCL12P48061 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.37□□□□□ -2.19
CXCL12P48061 AL121601.2-201ENST00000438019 707 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 MIR449C-201ENST00000516047 92 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 SNORA31.16-201ENST00000516773 139 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL12P48061 MTND4P7-201ENST00000523876 130 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 COPS8P3-201ENST00000526024 482 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 AC115990.1-201ENST00000526957 301 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
CXCL12P48061 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.37□□□□□ -2.19
CXCL12P48061 AC090115.3-201ENST00000553218 849 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.37□□□□□ -2.19
CXCL12P48061 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL12P48061 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.37□□□□□ -2.19
CXCL12P48061 AL034555.1-201ENST00000604816 211 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 AC018889.1-201ENST00000605372 397 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CXCL12P48061 SNORD98-201ENST00000636377 67 ntBASIC1.37□□□□□ -2.19
CXCL12P48061 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CXCL12P48061 RNU6-1164P-201ENST00000364428 107 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 Y_RNA.255-201ENST00000364581 97 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 SNORD116-2-201ENST00000384274 95 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 SNORD116-6-201ENST00000384711 96 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 RNA5SP219-201ENST00000390940 113 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AL606923.1-201ENST00000406616 190 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.36□□□□□ -2.19
CXCL12P48061 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AL590135.1-201ENST00000422215 156 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AL590556.1-201ENST00000423231 483 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC019205.3-201ENST00000424573 156 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL12P48061 CBX3P6-201ENST00000430257 527 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 SNAP23P1-201ENST00000433229 246 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC244670.1-201ENST00000436879 112 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC016700.2-201ENST00000446011 156 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL12P48061 MTCO2P18-201ENST00000457151 658 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC015911.1-201ENST00000495111 156 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL12P48061 AC091874.1-201ENST00000511402 339 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 SNORA40.12-201ENST00000516329 111 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 RNU6-1038P-201ENST00000516516 104 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC069113.1-201ENST00000517763 267 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC016957.1-201ENST00000534895 309 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 HSPE1P4-201ENST00000550617 308 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 TRAV32-201ENST00000553993 340 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL12P48061 MIR4424-201ENST00000585257 86 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC087683.1-201ENST00000591187 441 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL12P48061 AC139792.3-201ENST00000623525 224 ntBASIC1.36□□□□□ -2.19
CXCL12P48061 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CXCL12P48061 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL12P48061 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL12P48061 Y_RNA.51-201ENST00000362725 102 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 SNORD32B-201ENST00000364460 84 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 RNU6-1141P-201ENST00000364520 107 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 SNORD14D-201ENST00000384390 87 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 MIR597-201ENST00000384968 97 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 SNORD73A-201ENST00000386062 65 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 SNORA40.19-201ENST00000390846 128 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AL663109.1-201ENST00000411498 844 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL12P48061 AL158823.1-201ENST00000418441 478 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms