Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 EIF4A1P12-201ENST00000551910 141 ntBASIC0.06□□□□□ -2.4
CKS2P33552 MIR4524B-201ENST00000581569 115 ntBASIC0.06□□□□□ -2.4
CKS2P33552 BNIP3P26-201ENST00000600827 554 ntBASIC0.06□□□□□ -2.4
CKS2P33552 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
CKS2P33552 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CKS2P33552 RNU6-545P-201ENST00000362681 104 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RNU4-48P-201ENST00000365559 182 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RNU6-378P-201ENST00000384324 107 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RNU6-16P-201ENST00000384385 107 ntBASIC0.05□□□□□ -2.4
CKS2P33552 SNORA26.3-201ENST00000391119 136 ntBASIC0.05□□□□□ -2.4
CKS2P33552 AL034345.1-201ENST00000407768 123 ntBASIC0.05□□□□□ -2.4
CKS2P33552 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.05□□□□□ -2.4
CKS2P33552 HSFY7P-201ENST00000432672 318 ntBASIC0.05□□□□□ -2.4
CKS2P33552 USP9YP28-201ENST00000435142 589 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RPS25P9-201ENST00000435591 252 ntBASIC0.05□□□□□ -2.4
CKS2P33552 HSFY8P-201ENST00000437934 318 ntBASIC0.05□□□□□ -2.4
CKS2P33552 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.05□□□□□ -2.4
CKS2P33552 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.05□□□□□ -2.4
CKS2P33552 AC108729.3-201ENST00000513484 108 ntBASIC0.05□□□□□ -2.4
CKS2P33552 FABP5P5-201ENST00000515537 406 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RNA5SP216-201ENST00000516111 123 ntBASIC0.05□□□□□ -2.4
CKS2P33552 AC024995.1-201ENST00000523014 93 ntBASIC0.05□□□□□ -2.4
CKS2P33552 AC090049.2-201ENST00000550377 109 ntBASIC0.05□□□□□ -2.4
CKS2P33552 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.05□□□□□ -2.4
CKS2P33552 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.05□□□□□ -2.4
CKS2P33552 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.05□□□□□ -2.4
CKS2P33552 AC136443.5-201ENST00000603741 370 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RPL17P51-201ENST00000605218 238 ntBASIC0.05□□□□□ -2.4
CKS2P33552 RNY1P10-201ENST00000363268 113 ntBASIC0.04□□□□□ -2.4
CKS2P33552 RNU4-56P-201ENST00000364700 142 ntBASIC0.04□□□□□ -2.4
CKS2P33552 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CKS2P33552 RNU6-342P-201ENST00000384521 104 ntBASIC0.04□□□□□ -2.4
CKS2P33552 MIR660-201ENST00000385235 97 ntBASIC0.04□□□□□ -2.4
CKS2P33552 RNU6-321P-201ENST00000410912 106 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC019070.1-201ENST00000415008 1024 ntBASIC0.04□□□□□ -2.4
CKS2P33552 MTND4P3-201ENST00000417829 541 ntBASIC0.04□□□□□ -2.4
CKS2P33552 RPL17P35-201ENST00000432217 549 ntBASIC0.04□□□□□ -2.4
CKS2P33552 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.04□□□□□ -2.4
CKS2P33552 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS2P33552 RPL39P39-201ENST00000455840 151 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.04□□□□□ -2.4
CKS2P33552 RPS29P1-201ENST00000465274 159 ntBASIC0.04□□□□□ -2.4
CKS2P33552 SNRPGP7-201ENST00000469016 106 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS2P33552 RPS23P5-201ENST00000495419 428 ntBASIC0.04□□□□□ -2.4
CKS2P33552 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS2P33552 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS2P33552 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.04□□□□□ -2.4
CKS2P33552 TMF1P1-201ENST00000576058 373 ntBASIC0.04□□□□□ -2.4
CKS2P33552 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
CKS2P33552 MIR544B-201ENST00000582372 78 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.04□□□□□ -2.4
CKS2P33552 AC078795.3-201ENST00000602913 472 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC022217.4-201ENST00000604389 163 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AL356157.2-201ENST00000605122 111 ntBASIC0.04□□□□□ -2.4
CKS2P33552 AC144521.1-201ENST00000607148 956 ntBASIC0.04□□□□□ -2.4
CKS2P33552 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.04□□□□□ -2.4
CKS2P33552 7SK.10-201ENST00000621414 298 ntBASIC0.04□□□□□ -2.4
CKS2P33552 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.04□□□□□ -2.4
CKS2P33552 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CKS2P33552 RNU6-371P-201ENST00000364283 108 ntBASIC0.03□□□□□ -2.4
CKS2P33552 Y_RNA.287-201ENST00000364853 94 ntBASIC0.03□□□□□ -2.4
CKS2P33552 SNORA36.2-201ENST00000384004 127 ntBASIC0.03□□□□□ -2.4
CKS2P33552 RNU6-692P-201ENST00000384496 107 ntBASIC0.03□□□□□ -2.4
CKS2P33552 RN7SKP200-201ENST00000410564 320 ntBASIC0.03□□□□□ -2.4
CKS2P33552 RNU6-1245P-201ENST00000411130 106 ntBASIC0.03□□□□□ -2.4
CKS2P33552 EEF1A1P40-201ENST00000412883 573 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.03□□□□□ -2.4
CKS2P33552 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
CKS2P33552 AC245047.8-201ENST00000456455 284 ntBASIC0.03□□□□□ -2.4
CKS2P33552 RNU6-917P-201ENST00000516294 104 ntBASIC0.03□□□□□ -2.4
CKS2P33552 RNU2-10P-201ENST00000516375 211 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC106038.2-201ENST00000520706 568 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC027419.1-201ENST00000522976 328 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC026616.1-201ENST00000523157 525 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CKS2P33552 MIR5000-201ENST00000577717 103 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC011195.1-201ENST00000578177 177 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AL158032.1-201ENST00000605401 106 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC091965.4-201ENST00000607691 587 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.03□□□□□ -2.4
CKS2P33552 AC097065.2-201ENST00000608159 533 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC131235.4-201ENST00000609288 620 ntBASIC0.03□□□□□ -2.4
CKS2P33552 AC097478.2-201ENST00000610572 514 ntBASIC0.03□□□□□ -2.4
CKS2P33552 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.03□□□□□ -2.4
CKS2P33552 MIR8054-201ENST00000620877 86 ntBASIC0.03□□□□□ -2.4
CKS2P33552 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.03□□□□□ -2.4
CKS2P33552 RNU6-560P-201ENST00000364007 108 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RNU6-224P-201ENST00000384055 107 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RNU6-417P-201ENST00000384712 107 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RNA5SP467-201ENST00000391274 118 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AL451046.2-201ENST00000403074 277 ntBASIC0.02□□□□□ -2.41
CKS2P33552 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RNA5SP222-201ENST00000411039 105 ntBASIC0.02□□□□□ -2.41
CKS2P33552 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS2P33552 MRPS18CP6-201ENST00000423587 223 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CKS2P33552 AC007283.2-201ENST00000424739 197 ntBASIC0.02□□□□□ -2.41
CKS2P33552 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms