Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MIR3618-201ENST00000580330 88 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 MIR3136-201ENST00000583498 78 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 AC022217.4-201ENST00000604389 163 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 AC087741.2-201ENST00000619415 172 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA3O60609 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA3O60609 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA3O60609 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA3O60609 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
GFRA3O60609 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
GFRA3O60609 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GFRA3O60609 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA3O60609 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.37□□□□□ -1.71
GFRA3O60609 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA3O60609 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA3O60609 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA3O60609 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.36□□□□□ -1.71
GFRA3O60609 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA3O60609 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA3O60609 RNU6-888P-201ENST00000363010 101 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 SNORD116-10-201ENST00000363791 102 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 SNORD45B-201ENST00000364617 72 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 Y_RNA.386-201ENST00000383913 105 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 MIR548A2-201ENST00000384956 97 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 U8.17-201ENST00000391292 132 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 MIR1185-2-201ENST00000408687 86 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 RNA5SP390-201ENST00000410191 113 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 RNA5SP201-201ENST00000410316 124 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 AL353813.1-201ENST00000440700 253 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 RN7SL517P-201ENST00000462240 305 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 AIG1P1-201ENST00000503376 148 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 RNA5SP49-201ENST00000516450 115 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 RNU6-1270P-201ENST00000517128 108 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 AC027176.1-201ENST00000560204 514 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 AC090897.2-201ENST00000581715 130 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 Y_RNA.788-201ENST00000622394 112 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 U2.21-201ENST00000637295 81 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA3O60609 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA3O60609 AC016588.2-201ENST00000632484 3021 ntBASIC4.36□□□□□ -1.71
GFRA3O60609 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.36□□□□□ -1.71
GFRA3O60609 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA3O60609 AL022322.2-201ENST00000624072 20397 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 RNU6-600P-201ENST00000362524 99 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 Y_RNA.155-201ENST00000363632 101 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 SNORA18.2-201ENST00000383865 132 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 RNU6-622P-201ENST00000384272 103 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GFRA3O60609 RNU2-40P-201ENST00000410833 196 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 COX5BP7-201ENST00000414780 274 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 RN7SL691P-201ENST00000494487 301 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 RNU2-44P-201ENST00000516795 194 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 RNU7-172P-201ENST00000517125 64 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 RNA5SP291-201ENST00000517222 105 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 MIR1255B1-201ENST00000636325 63 ntBASIC4.35□□□□□ -1.71
GFRA3O60609 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.35□□□□□ -1.71
GFRA3O60609 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
GFRA3O60609 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
GFRA3O60609 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA3O60609 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA3O60609 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.34□□□□□ -1.71
GFRA3O60609 AP000542.2-201ENST00000623199 6179 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
GFRA3O60609 UBE2DNL-203ENST00000474922 222 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 AC107918.3-201ENST00000533272 382 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 MTND6P33-201ENST00000571794 183 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 HSPE1P19-201ENST00000603327 295 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 AL021997.2-201ENST00000615674 271 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 AL450345.1-202ENST00000605741 3881 ntBASIC4.34□□□□□ -1.71
GFRA3O60609 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA3O60609 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA3O60609 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
GFRA3O60609 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.34□□□□□ -1.72
GFRA3O60609 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.72
GFRA3O60609 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
GFRA3O60609 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA3O60609 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA3O60609 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.33□□□□□ -1.72
GFRA3O60609 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA3O60609 SMG1P4-204ENST00000523028 4131 ntBASIC4.33□□□□□ -1.72
GFRA3O60609 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms