Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KDM1AO60341 Y_RNA.458-201ENST00000384240 102 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 RNU6-713P-201ENST00000384761 107 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 RNA5SP201-201ENST00000410316 124 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
KDM1AO60341 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 EIF4EP4-201ENST00000424916 578 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 WARS2P1-201ENST00000429678 537 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.21□□□□□ -1.9
KDM1AO60341 AL731563.1-201ENST00000442202 214 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.21□□□□□ -1.9
KDM1AO60341 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.21□□□□□ -1.9
KDM1AO60341 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 RNU6-1012P-201ENST00000516606 109 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 RNU6-897P-201ENST00000517135 105 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC093023.1-201ENST00000547375 507 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC004817.2-201ENST00000561794 651 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC103810.1-201ENST00000579873 453 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KDM1AO60341 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 U4.1-201ENST00000620349 87 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KDM1AO60341 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 AC026241.1-201ENST00000517873 2142 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU4-15P-201ENST00000362613 141 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNA5SP361-201ENST00000362686 118 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU5F-3P-201ENST00000363767 117 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 SNORD46.1-201ENST00000364139 104 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 Y_RNA.214-201ENST00000364201 112 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU6-611P-201ENST00000384276 104 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU6-318P-201ENST00000384283 103 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
KDM1AO60341 RNU6-1093P-201ENST00000391194 107 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU4-47P-201ENST00000410876 114 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 RNU6-130P-201ENST00000411112 103 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 ELOCP20-201ENST00000422460 345 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 AL445305.1-201ENST00000432577 575 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.2□□□□□ -1.9
KDM1AO60341 AC007215.1-201ENST00000464893 276 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 Y_RNA.713-201ENST00000517013 96 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
KDM1AO60341 MYL12BP1-201ENST00000569826 507 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 AL356575.1-201ENST00000603008 283 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 AC010205.1-201ENST00000616668 449 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
KDM1AO60341 AC130454.1-201ENST00000622948 401 ntBASIC3.2□□□□□ -1.9
KDM1AO60341 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KDM1AO60341 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KDM1AO60341 RNU6-873P-201ENST00000363833 107 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 RNU6-280P-201ENST00000364145 104 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 RNU6-281P-201ENST00000384212 103 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 RNU6-1001P-201ENST00000411265 100 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 RPL19P1-201ENST00000411635 428 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.19□□□□□ -1.9
KDM1AO60341 AC112220.1-201ENST00000434628 355 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.19□□□□□ -1.9
KDM1AO60341 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.19□□□□□ -1.9
KDM1AO60341 DYNLT3P2-201ENST00000442517 295 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.19□□□□□ -1.9
KDM1AO60341 RPL27AP5-201ENST00000469428 449 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.19□□□□□ -1.9
KDM1AO60341 RNU6-1143P-201ENST00000516125 104 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 RN7SKP49-201ENST00000516675 260 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
KDM1AO60341 AC027176.1-201ENST00000560204 514 ntBASIC3.19□□□□□ -1.9
KDM1AO60341 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.19□□□□□ -1.9
KDM1AO60341 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KDM1AO60341 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
KDM1AO60341 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.19□□□□□ -1.9
KDM1AO60341 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KDM1AO60341 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
KDM1AO60341 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KDM1AO60341 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KDM1AO60341 BX322639.1-202ENST00000423987 2213 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 Y_RNA.183-201ENST00000363882 113 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 SNORA38.1-201ENST00000364172 131 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 RNU6-702P-201ENST00000364982 107 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KDM1AO60341 RNU6-378P-201ENST00000384324 107 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 Y_RNA.512-201ENST00000384518 102 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 Y_RNA.556-201ENST00000384677 113 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.18□□□□□ -1.9
KDM1AO60341 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.18□□□□□ -1.9
KDM1AO60341 AC008155.2-201ENST00000464337 397 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 AC145146.1-201ENST00000496370 254 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
KDM1AO60341 RNY3P15-201ENST00000516297 97 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
KDM1AO60341 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.18□□□□□ -1.9
KDM1AO60341 AL670379.2-201ENST00000604983 252 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms