Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRICKLE3O43900 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
PRICKLE3O43900 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.42□□□□□ -1.86
PRICKLE3O43900 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
PRICKLE3O43900 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
PRICKLE3O43900 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRICKLE3O43900 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRICKLE3O43900 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRICKLE3O43900 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRICKLE3O43900 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 MFSD8-233ENST00000641482 4860 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 Y_RNA.43-201ENST00000362670 111 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RNU6-1272P-201ENST00000362776 107 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RNU6-275P-201ENST00000364910 107 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 MIR1183-201ENST00000408856 89 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AC098614.2-201ENST00000426040 255 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL356867.1-201ENST00000429623 299 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL049873.1-201ENST00000480540 376 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RPL23AP94-201ENST00000512518 302 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RNA5SP290-201ENST00000517133 127 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RNU6-58P-201ENST00000517143 103 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 RN7SKP57-201ENST00000517248 293 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AC024153.1-201ENST00000603103 365 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRICKLE3O43900 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
PRICKLE3O43900 AC110491.1-201ENST00000562191 2010 ntBASIC3.41□□□□□ -1.86
PRICKLE3O43900 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PRICKLE3O43900 AC092593.1-201ENST00000515413 1815 ntBASIC3.4□□□□□ -1.86
PRICKLE3O43900 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PRICKLE3O43900 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.4□□□□□ -1.86
PRICKLE3O43900 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.4□□□□□ -1.86
PRICKLE3O43900 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 MIR423-201ENST00000362201 94 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNA5SP295-201ENST00000362655 121 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNU4-80P-201ENST00000363200 141 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNU4-17P-201ENST00000365598 141 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 MIR539-201ENST00000365690 78 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNU2-52P-201ENST00000410680 190 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNA5SP31-201ENST00000411144 127 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RPL30P13-201ENST00000418873 348 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 CR769767.1-201ENST00000436337 346 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC243964.1-201ENST00000441814 261 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 AP001486.1-201ENST00000463339 476 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC091874.1-201ENST00000511402 339 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNU6-966P-201ENST00000516479 104 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 SNORA43.2-201ENST00000516652 128 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 RNU6-1198P-201ENST00000516904 67 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AP002001.1-203ENST00000534002 267 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC090132.2-201ENST00000615881 347 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 U4.6-201ENST00000621618 127 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRICKLE3O43900 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.87
PRICKLE3O43900 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.4□□□□□ -1.87
PRICKLE3O43900 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRICKLE3O43900 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRICKLE3O43900 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
PRICKLE3O43900 SNORD32A-201ENST00000364805 84 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 RNA5SP267-201ENST00000364893 126 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 EBAG9P1-201ENST00000418955 543 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 RPL23AP95-201ENST00000426806 265 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AL512844.2-201ENST00000433990 593 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.39□□□□□ -1.87
PRICKLE3O43900 RPL32P34-201ENST00000486380 400 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.39□□□□□ -1.87
PRICKLE3O43900 RNU4-57P-201ENST00000515980 135 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 Y_RNA.686-201ENST00000516548 134 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AC026333.2-201ENST00000542164 106 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AL356157.2-201ENST00000605122 111 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.39□□□□□ -1.87
PRICKLE3O43900 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AL357075.2-201ENST00000614906 189 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AC068831.7-201ENST00000616954 363 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 AC008873.1-201ENST00000625051 138 ntBASIC3.39□□□□□ -1.87
PRICKLE3O43900 SNORA43.4-201ENST00000629559 138 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 829 ms