Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 EIF4A1P12-201ENST00000551910 141 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AC125232.2-201ENST00000592457 143 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 SNRPGP20-201ENST00000604477 205 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.772-201ENST00000606692 102 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AC010999.1-201ENST00000611856 324 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 AC240442.1-201ENST00000616055 283 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 MIR422A-201ENST00000362286 90 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.143-201ENST00000363520 106 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-770P-201ENST00000363929 105 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.222-201ENST00000364264 102 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-806P-201ENST00000365147 105 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 SNORA46.1-201ENST00000391069 153 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RPS26P42-201ENST00000413485 326 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 SDAD1P3-201ENST00000427380 333 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 RPL30P4-201ENST00000429309 333 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 AC073910.1-201ENST00000445047 438 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC163A0A0D9SF12 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.26-201ENST00000362539 101 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-727P-201ENST00000363592 107 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 SNORA68.1-201ENST00000364537 132 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 HMGN2P8-201ENST00000391458 268 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RNA5SP201-201ENST00000410316 124 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC112220.1-201ENST00000434628 355 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 SCARNA3-201ENST00000517097 143 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AL161670.1-201ENST00000554348 137 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 MIR3149-201ENST00000584629 83 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC005520.5-201ENST00000613926 164 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC163A0A0D9SF12 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.179-201ENST00000363844 90 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 SNORD115-8-201ENST00000363856 82 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 SNORD115-38-201ENST00000365037 82 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 RPL21P1-201ENST00000399532 476 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.595-201ENST00000410403 105 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.597-201ENST00000410463 100 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-130P-201ENST00000411112 103 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 FCF1P4-201ENST00000448326 183 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AC007215.1-201ENST00000464893 276 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AC090515.1-201ENST00000465295 476 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 CKS1BP2-201ENST00000497342 240 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-1012P-201ENST00000516606 109 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 AC130454.1-201ENST00000622948 401 ntBASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC163A0A0D9SF12 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 BX322639.1-202ENST00000423987 2213 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 SNORA18.2-201ENST00000383865 132 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 MIR329-1-201ENST00000385028 80 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 RNA5SP213-201ENST00000391031 106 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AC107083.1-201ENST00000439643 279 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 RPS27P29-201ENST00000463110 252 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AC067942.3-201ENST00000512025 362 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms