Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AL121890.1-201ENST00000435457 205 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC010095.1-201ENST00000443543 144 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC073415.1-201ENST00000449240 153 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC130509.1-201ENST00000464158 433 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 RPS23P5-201ENST00000495419 428 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 RNU2-34P-201ENST00000516534 121 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC104581.2-201ENST00000572227 430 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AL158827.2-201ENST00000602494 330 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 AL691447.3-201ENST00000635020 330 ntBASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.56□□□□□ -2.16
CHRNA9Q9UGM1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-348P-201ENST00000384386 107 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AL358934.1-201ENST00000432346 324 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AL357134.1-201ENST00000445848 426 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RPS27AP8-201ENST00000452665 445 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 BET1P1-201ENST00000482276 359 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AC091885.1-201ENST00000506658 268 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RN7SKP298-201ENST00000515950 94 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 MIR449C-201ENST00000516047 92 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 SNORA14.1-201ENST00000516113 141 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AC087854.1-201ENST00000519706 414 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 MIR4424-201ENST00000585257 86 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AC073648.5-201ENST00000603502 305 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 AC078883.4-201ENST00000623218 367 ntBASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-562P-201ENST00000362731 107 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-112P-201ENST00000363599 104 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 SNORA11.2-201ENST00000408318 127 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 MIR1289-2-201ENST00000408360 111 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU2-41P-201ENST00000410991 178 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RPS26P42-201ENST00000413485 326 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 ARL5AP1-201ENST00000418991 388 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 USP9YP29-201ENST00000445112 563 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-956P-201ENST00000458868 103 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU7-14P-201ENST00000459331 62 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC010409.1-201ENST00000487382 476 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC116337.1-201ENST00000509680 687 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC079140.3-201ENST00000511111 550 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 AC026470.2-201ENST00000561492 181 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CHRNA9Q9UGM1 MIR340-201ENST00000362125 95 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 RNU6-378P-201ENST00000384324 107 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 C8orf59P1-201ENST00000429930 303 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC069257.2-201ENST00000441819 155 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC007677.1-201ENST00000445757 515 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 TOMM22P6-201ENST00000465035 409 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 ATP5EP1-201ENST00000510257 156 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC016925.2-201ENST00000605108 242 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC005858.4-201ENST00000623191 700 ntBASIC1.53□□□□□ -2.16
CHRNA9Q9UGM1 AC120349.3-201ENST00000624377 529 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms