Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.1□□□□□ -1.59
NBPF3Q9H094 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.1□□□□□ -1.59
NBPF3Q9H094 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 MIR372-201ENST00000362225 67 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 RNU6-525P-201ENST00000363685 104 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 RNU6-1113P-201ENST00000384348 107 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 MIR1290-201ENST00000408735 78 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.1□□□□□ -1.59
NBPF3Q9H094 ABCF2P2-201ENST00000450549 296 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 AC021205.2-201ENST00000480069 347 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 SNORA31.20-201ENST00000517111 133 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.1□□□□□ -1.59
NBPF3Q9H094 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 MIR6134-201ENST00000617606 109 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 AC112484.5-201ENST00000624189 228 ntBASIC5.1□□□□□ -1.59
NBPF3Q9H094 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NBPF3Q9H094 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NBPF3Q9H094 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NBPF3Q9H094 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 MIR448-201ENST00000362131 111 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 Y_RNA.52-201ENST00000362760 96 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 RNY1P10-201ENST00000363268 113 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 Y_RNA.333-201ENST00000365274 102 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 MIR570-201ENST00000384917 97 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 MIR590-201ENST00000385008 97 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 AL590383.1-201ENST00000428602 75 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 RPL23AP83-201ENST00000434984 473 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.09□□□□□ -1.59
NBPF3Q9H094 RN7SL812P-201ENST00000493791 279 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 RNA5SP519-201ENST00000516480 119 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 MIR4286-201ENST00000580651 93 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 SNORD98-201ENST00000636377 67 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 AC068205.3-201ENST00000636385 468 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 U2.21-201ENST00000637295 81 ntBASIC5.09□□□□□ -1.59
NBPF3Q9H094 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
NBPF3Q9H094 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NBPF3Q9H094 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
NBPF3Q9H094 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.09□□□□□ -1.6
NBPF3Q9H094 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NBPF3Q9H094 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.09□□□□□ -1.6
NBPF3Q9H094 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NBPF3Q9H094 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NBPF3Q9H094 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
NBPF3Q9H094 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
NBPF3Q9H094 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NBPF3Q9H094 MAPK10-320ENST00000641462 6696 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NBPF3Q9H094 RNU1-14P-201ENST00000362759 152 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 SNORA63.5-201ENST00000363548 123 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 SNORD46.1-201ENST00000364139 104 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 RNA5SP175-201ENST00000364275 119 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 MIR325-201ENST00000385260 98 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 RN7SKP101-201ENST00000411376 320 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 CYCSP19-201ENST00000411715 316 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AL117339.2-201ENST00000430475 180 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 CALM2P4-201ENST00000430810 426 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AL021397.1-201ENST00000451806 248 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 SNORA70.12-201ENST00000516084 153 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AC100770.1-201ENST00000532310 322 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AC006064.5-201ENST00000541782 248 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AC025281.1-201ENST00000567026 265 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AC008739.3-201ENST00000603262 127 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AL137843.1-201ENST00000605078 385 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 AL138880.2-201ENST00000616214 239 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 MALAT1.1-201ENST00000618249 95 ntBASIC5.08□□□□□ -1.6
NBPF3Q9H094 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NBPF3Q9H094 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NBPF3Q9H094 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.08□□□□□ -1.6
NBPF3Q9H094 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NBPF3Q9H094 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NBPF3Q9H094 AC011266.1-201ENST00000624119 3569 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NBPF3Q9H094 AC118273.1-201ENST00000525324 3006 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 RNU6-1134P-201ENST00000365156 101 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 MIR518C-201ENST00000384822 101 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 RNU2-55P-201ENST00000411146 174 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 RNU6-1299P-201ENST00000516316 100 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.07□□□□□ -1.6
NBPF3Q9H094 AL049861.1-201ENST00000603130 150 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 SNORD115-40-201ENST00000606510 82 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 MIR8059-201ENST00000620427 81 ntBASIC5.07□□□□□ -1.6
NBPF3Q9H094 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.07□□□□□ -1.6
NBPF3Q9H094 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NBPF3Q9H094 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NBPF3Q9H094 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.07□□□□□ -1.6
NBPF3Q9H094 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NBPF3Q9H094 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NBPF3Q9H094 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.06□□□□□ -1.6
NBPF3Q9H094 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NBPF3Q9H094 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NBPF3Q9H094 RNU6-778P-201ENST00000363269 103 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms