Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC000123.3-201ENST00000624029 4975 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU1-65P-201ENST00000363919 148 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP122-201ENST00000384457 108 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORD56.6-201ENST00000384569 71 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-146P-201ENST00000384602 108 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR152-201ENST00000385212 87 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR579-201ENST00000385221 98 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-882P-201ENST00000391025 103 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA11.2-201ENST00000408318 127 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR1275-201ENST00000408770 80 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC016397.1-201ENST00000412463 242 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CYP4F29P-201ENST00000420685 446 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 REREP1Y-201ENST00000422655 198 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL12P12-201ENST00000424633 501 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL7AP49-201ENST00000429522 581 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AL591438.1-201ENST00000433508 581 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC064862.5-201ENST00000440618 334 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 snoU13.2-201ENST00000459201 104 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL180P-201ENST00000466769 294 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC083806.1-201ENST00000468934 316 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL836P-201ENST00000476140 296 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC098583.1-201ENST00000480875 255 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AP002453.1-201ENST00000492327 668 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL306P-201ENST00000492941 296 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL143P-201ENST00000496780 297 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SCARNA6-201ENST00000515982 265 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-947P-201ENST00000516264 106 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-941P-201ENST00000516346 108 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SKP11-201ENST00000517018 287 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA40.17-201ENST00000517256 115 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC120036.3-201ENST00000517826 292 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 IGLV1-62-201ENST00000518003 441 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC007537.1-201ENST00000539347 327 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC092490.3-201ENST00000545370 572 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC015712.3-201ENST00000559380 164 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 NAMPTP3-201ENST00000569273 224 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC008507.3-201ENST00000585753 472 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC011921.2-201ENST00000589465 152 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA28-201ENST00000606769 126 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC068870.2-201ENST00000620635 389 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC091953.3-201ENST00000623220 236 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AL049767.1-202ENST00000637826 242 ntBASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-4Q9BYR3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms