Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC097473.1-201ENST00000508142 408 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 AC093303.1-201ENST00000514549 295 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 RN7SKP40-201ENST00000517211 242 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 APOOP3-201ENST00000536787 586 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 CYP4A27P-201ENST00000567218 190 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 MIR5696-201ENST00000578474 85 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 SCARNA4-201ENST00000629045 128 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 SNORA43.4-201ENST00000629559 138 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 RNU4-79P-201ENST00000362764 141 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 SNORD50.1-201ENST00000362987 71 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 RNU4-53P-201ENST00000410828 140 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC012306.1-201ENST00000423267 114 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 UBBP3-201ENST00000445497 241 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC079354.2-201ENST00000453523 154 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC005741.1-201ENST00000511094 432 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC091874.1-201ENST00000511402 339 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 RNU6-264P-201ENST00000517134 104 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 CYP2C61P-201ENST00000604072 290 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 HMGB1P24-202ENST00000615653 685 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTFDC1Q9BY42 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC069528.2-201ENST00000624849 1991 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RNU6-1059P-201ENST00000363752 98 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RNA5SP494-201ENST00000410653 129 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RPS26P42-201ENST00000413485 326 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 ELOCP24-201ENST00000456370 334 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RPL7P42-201ENST00000481005 679 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.718-201ENST00000517110 102 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 RNU6-586P-201ENST00000517265 104 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC093027.1-201ENST00000546698 429 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC093249.1-201ENST00000567049 203 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 Z98751.3-201ENST00000604447 521 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 MTND5P10-201ENST00000603719 1809 ntBASIC3.16□□□□□ -1.9
RTFDC1Q9BY42 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RTFDC1Q9BY42 MTND4P29-201ENST00000503122 1372 ntBASIC3.15□□□□□ -1.9
RTFDC1Q9BY42 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 SNORA29-201ENST00000384183 140 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.460-201ENST00000384255 102 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 SNORA75.6-201ENST00000391318 127 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 RPL30P15-201ENST00000457129 321 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 RPL30P10-201ENST00000488148 337 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 SNORA9.3-201ENST00000516383 129 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 RNU6-1198P-201ENST00000516904 67 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 MIR4635-201ENST00000583759 79 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 AC090517.3-201ENST00000625170 141 ntBASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RTFDC1Q9BY42 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RNU6-595P-201ENST00000363944 107 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 SNORD115-32-201ENST00000364079 82 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RNU6-310P-201ENST00000384655 107 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RNU6-220P-201ENST00000390919 107 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPL21P75-201ENST00000396599 483 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPL21P28-201ENST00000401418 483 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPS20P15-201ENST00000412792 311 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC243428.1-201ENST00000421099 264 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPL21P39-201ENST00000463605 483 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 FO393415.2-201ENST00000480085 343 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC087190.1-201ENST00000484462 480 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC093591.1-201ENST00000491435 481 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPL21P16-201ENST00000495531 483 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RNU7-175P-201ENST00000515915 61 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms