Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.5□□□□□ -2.17
FOXC2Q99958 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 CCDC34P1-201ENST00000507441 517 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.5□□□□□ -2.17
FOXC2Q99958 MIR5583-1-201ENST00000580941 59 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 AL022345.1-201ENST00000607292 135 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
FOXC2Q99958 U4.7-201ENST00000638126 106 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
FOXC2Q99958 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 Y_RNA.112-201ENST00000363250 102 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 Y_RNA.191-201ENST00000363972 113 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 Y_RNA.436-201ENST00000384097 102 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 Y_RNA.559-201ENST00000384686 107 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 CALM2P3-201ENST00000400429 449 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 SUMO2P12-201ENST00000405924 140 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 RNA5SP489-201ENST00000410986 109 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXC2Q99958 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXC2Q99958 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.49□□□□□ -2.17
FOXC2Q99958 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXC2Q99958 RPL39P29-201ENST00000447779 157 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 SNRPFP3-201ENST00000457792 225 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 RNU7-63P-201ENST00000459054 62 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC019235.1-201ENST00000503847 207 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 RNU6-965P-201ENST00000516721 96 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXC2Q99958 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.49□□□□□ -2.17
FOXC2Q99958 COPS8P3-201ENST00000526024 482 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC023050.3-201ENST00000541142 333 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC012507.3-201ENST00000603556 477 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC008536.2-201ENST00000607284 349 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 AL359880.1-201ENST00000621879 266 ntBASIC1.49□□□□□ -2.17
FOXC2Q99958 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
FOXC2Q99958 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
FOXC2Q99958 Y_RNA.167-201ENST00000363735 109 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 Y_RNA.318-201ENST00000365131 97 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 Y_RNA.381-201ENST00000365666 102 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RNU6-1042P-201ENST00000384204 107 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 Y_RNA.480-201ENST00000384364 102 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 SNORD116-4-201ENST00000384733 96 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 MIR613-201ENST00000385248 95 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 MTCO3P40-201ENST00000392516 676 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RNU6-648P-201ENST00000410190 107 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 Y_RNA.597-201ENST00000410463 100 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RNA5SP501-201ENST00000410990 112 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AL030996.1-201ENST00000411430 235 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 SNORD56-201ENST00000413522 71 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC009310.1-201ENST00000414414 451 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RPL31P63-201ENST00000422565 375 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXC2Q99958 TIMM9P3-201ENST00000428659 274 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RPS15AP10-201ENST00000432472 382 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXC2Q99958 PRPS1P1-201ENST00000445305 876 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RNU7-167P-201ENST00000459160 62 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 RNU6-261P-201ENST00000459506 102 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXC2Q99958 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXC2Q99958 AP005660.1-201ENST00000522972 293 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AP001893.2-201ENST00000526949 202 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC090115.3-201ENST00000553218 849 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.48□□□□□ -2.17
FOXC2Q99958 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXC2Q99958 AC091135.1-201ENST00000585943 307 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 CYP2C61P-201ENST00000604072 290 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC092954.2-201ENST00000609103 430 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
FOXC2Q99958 HULC.1-201ENST00000612720 240 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC063943.3-201ENST00000615562 356 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AL354950.2-201ENST00000617939 290 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC073534.2-201ENST00000620377 381 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 AC139792.3-201ENST00000623525 224 ntBASIC1.48□□□□□ -2.17
FOXC2Q99958 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
FOXC2Q99958 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.47□□□□□ -2.17
FOXC2Q99958 Y_RNA.99-201ENST00000363138 105 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNU6-623P-201ENST00000363143 105 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNU6-1322P-201ENST00000364309 107 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNU5E-7P-201ENST00000365290 117 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 Y_RNA.409-201ENST00000383990 98 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNU6-38P-201ENST00000384085 107 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 BTF3L4P2-201ENST00000392798 346 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RPL21P1-201ENST00000399532 476 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 MTCO3P41-201ENST00000414801 328 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms