Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MIR561-201ENST00000385216 97 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 RNU6-308P-201ENST00000390957 107 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 RNA5SP492-201ENST00000411330 114 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF428Q96B54 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF428Q96B54 AC018865.2-201ENST00000423631 129 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 RPS27P29-201ENST00000463110 252 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 AC140059.1-201ENST00000489238 361 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.95□□□□□ -1.78
ZNF428Q96B54 AC245166.1-201ENST00000521012 253 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF428Q96B54 AL360085.1-201ENST00000604713 532 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF428Q96B54 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF428Q96B54 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF428Q96B54 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 Y_RNA.31-201ENST00000362574 102 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 RNU1-72P-201ENST00000362976 153 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 RNU6-220P-201ENST00000390919 107 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 MIR208B-201ENST00000401172 77 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 MTND2P23-201ENST00000422990 651 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC145146.1-201ENST00000496370 254 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC083906.5-201ENST00000503722 328 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 CYCSP23-201ENST00000519781 313 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AC091925.1-201ENST00000623204 462 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 AL021368.2-201ENST00000606125 5352 ntBASIC3.94□□□□□ -1.78
ZNF428Q96B54 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF428Q96B54 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
ZNF428Q96B54 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF428Q96B54 SNORD56.5-201ENST00000364281 72 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 Y_RNA.405-201ENST00000383979 100 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 Y_RNA.451-201ENST00000384200 100 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 Y_RNA.524-201ENST00000384564 100 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 Y_RNA.561-201ENST00000384694 100 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 RNU1-139P-201ENST00000391307 165 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 RNU6-1156P-201ENST00000410365 100 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 RNA5SP274-201ENST00000410484 108 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF428Q96B54 AC009969.1-201ENST00000438726 172 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 AL137792.2-201ENST00000443484 235 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 AL035666.1-201ENST00000446195 348 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 AL353752.1-201ENST00000454946 260 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF428Q96B54 GNAI2P1-201ENST00000541815 315 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF428Q96B54 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.93□□□□□ -1.78
ZNF428Q96B54 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF428Q96B54 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF428Q96B54 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF428Q96B54 Y_RNA.162-201ENST00000363683 102 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.319-201ENST00000365138 92 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.526-201ENST00000384572 110 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 RNU6-541P-201ENST00000384709 110 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 MIR32-201ENST00000384965 70 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 RN7SL20P-201ENST00000488827 297 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF428Q96B54 ANXA2P1-201ENST00000505539 926 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 RN7SKP43-201ENST00000516173 320 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 ELOCP31-201ENST00000540463 467 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 AC023824.2-201ENST00000566185 400 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 MIR3171-201ENST00000584270 74 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 AC010928.2-201ENST00000588017 287 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.812-201ENST00000610788 101 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.784-201ENST00000613803 101 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 AC040896.1-201ENST00000613819 479 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.787-201ENST00000616522 101 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.780-201ENST00000617336 101 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 Y_RNA.801-201ENST00000619005 101 ntBASIC3.92□□□□□ -1.78
ZNF428Q96B54 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF428Q96B54 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF428Q96B54 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF428Q96B54 AC000403.1-201ENST00000613696 3585 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF428Q96B54 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF428Q96B54 MIR148B-201ENST00000362252 99 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 SNORD32B-201ENST00000364460 84 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 Y_RNA.445-201ENST00000384168 102 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 U8.10-201ENST00000384260 133 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 SNORA46.1-201ENST00000391069 153 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 AL353997.1-201ENST00000432936 108 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF428Q96B54 RPL21P2-201ENST00000440049 481 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 UQCRHP3-201ENST00000451503 251 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 UBE2DNL-203ENST00000474922 222 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 SNORA25.11-201ENST00000515935 105 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 RNU6-1114P-201ENST00000516022 107 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 AC090617.3-201ENST00000573670 475 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF428Q96B54 AC135776.4-201ENST00000624300 1904 ntBASIC3.91□□□□□ -1.78
ZNF428Q96B54 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF428Q96B54 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms