Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC016717.1-201ENST00000448918 286 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 snoU13.28-201ENST00000459235 104 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 AC008897.1-201ENST00000494006 347 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 RPS29P21-201ENST00000496272 170 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 SNORD32B-201ENST00000364460 84 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RPL7AP28-201ENST00000464513 571 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RPL35AP15-201ENST00000468042 339 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 AC108751.2-201ENST00000469993 231 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 AC078918.1-201ENST00000498515 228 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RNU6-521P-201ENST00000516663 105 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 SCARNA15-202ENST00000516881 127 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 DEFB131E-201ENST00000532329 154 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 MIR3667-201ENST00000581025 74 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 MIR3609-201ENST00000582661 80 ntBASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCD2Q8WV60 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 AL136964.1-201ENST00000622038 2990 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RNU6-1296P-201ENST00000383879 107 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 U3.30-201ENST00000391308 210 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 SDHCP2-201ENST00000398565 501 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RNU2-49P-201ENST00000410666 184 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 AL645608.4-201ENST00000423619 154 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RPL39P25-201ENST00000449384 154 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RN7SL860P-201ENST00000473738 223 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RPS26P48-201ENST00000491713 339 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 SCARNA23-201ENST00000516060 130 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RNA5SP490-201ENST00000517141 136 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 MIR5699-201ENST00000578903 90 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 AC022726.1-201ENST00000587475 207 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 MIR6820-201ENST00000611508 62 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 LINC01355-201ENST00000566551 5444 ntBASIC4.81□□□□□ -1.64
PTCD2Q8WV60 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD2Q8WV60 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 RNU6-888P-201ENST00000363010 101 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 RNU6-690P-201ENST00000365242 106 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AC092017.2-201ENST00000427600 362 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AC093249.4-201ENST00000564755 259 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 FAM71BP1-201ENST00000604431 523 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 LINC00901.1-201ENST00000617252 152 ntBASIC4.8□□□□□ -1.64
PTCD2Q8WV60 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD2Q8WV60 AC010889.1-201ENST00000566193 2666 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD2Q8WV60 Y_RNA.344-201ENST00000365381 112 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 SNORD24-201ENST00000383884 75 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 MIR921-201ENST00000401133 56 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RPL30P4-201ENST00000429309 333 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 AL500522.2-201ENST00000448562 343 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 MRPS17P9-201ENST00000511924 393 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RNU2-13P-201ENST00000515909 113 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RNU6-693P-201ENST00000516134 107 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 RNU6-948P-201ENST00000516374 107 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 AC091042.1-201ENST00000579213 173 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 MIR3117-201ENST00000584034 78 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 AC008739.2-201ENST00000597006 317 ntBASIC4.79□□□□□ -1.64
PTCD2Q8WV60 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms