Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR873-201ENST00000401120 77 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 AC114982.1-201ENST00000469402 321 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1098P-201ENST00000516772 96 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 MIR4474-201ENST00000579189 78 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 MIR4765-201ENST00000585007 77 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 AC009487.4-201ENST00000624969 3585 ntBASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
DEPDC4Q8N2C3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNU4-10P-201ENST00000364383 140 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 Y_RNA.337-201ENST00000365312 102 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-969P-201ENST00000383900 105 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1168P-201ENST00000390831 104 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1154P-201ENST00000391001 104 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNA5SP354-201ENST00000391247 136 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-257P-201ENST00000410238 98 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RN7SKP27-201ENST00000410684 333 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 AL691449.1-201ENST00000426570 421 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 RBMY2UP-201ENST00000453474 324 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 snoU13.1-201ENST00000459157 104 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.11□□□□□ -1.75
DEPDC4Q8N2C3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-486P-201ENST00000363116 107 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 SNORA14A-201ENST00000364773 135 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-1228P-201ENST00000391014 107 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 MIR1283-1-201ENST00000408494 87 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 RPL23AP7-203ENST00000449021 469 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 RPL36AP41-201ENST00000493820 306 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 SCARNA22-201ENST00000503991 125 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 SCARNA8-201ENST00000515924 131 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 MIR4724-201ENST00000579485 89 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
DEPDC4Q8N2C3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 AC010332.2-201ENST00000613083 1904 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 RNU6-271P-201ENST00000363858 105 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 SNORA40-201ENST00000388090 126 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 MIR1294-201ENST00000408503 142 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 RPL30P13-201ENST00000418873 348 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 AL358232.1-201ENST00000448030 501 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 RPL36AP21-201ENST00000490372 323 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 RPS27P26-201ENST00000494583 239 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DEPDC4Q8N2C3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DEPDC4Q8N2C3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.09□□□□□ -1.76
DEPDC4Q8N2C3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.09□□□□□ -1.76
DEPDC4Q8N2C3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
DEPDC4Q8N2C3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AC006504.1-201ENST00000562493 3666 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 RNA5SP388-201ENST00000362584 119 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 SDHCP2-201ENST00000398565 501 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 MIR513C-201ENST00000401352 84 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AL139095.1-201ENST00000404326 391 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 RPL23AP1-201ENST00000428990 471 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AL162151.2-201ENST00000448875 158 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 RNU6-1007P-201ENST00000516586 107 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 MIR1254-2-201ENST00000579553 63 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 RN7SL690P-201ENST00000582087 240 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 MIR4753-201ENST00000585119 83 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 MIR432-201ENST00000606207 94 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AP005019.3-201ENST00000620418 560 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 AC125257.1-201ENST00000560400 2930 ntBASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.08□□□□□ -1.76
DEPDC4Q8N2C3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 MIR367-201ENST00000362299 68 ntBASIC4.07□□□□□ -1.76
DEPDC4Q8N2C3 Y_RNA.572-201ENST00000384757 98 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms