Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIR4724-201ENST00000579485 89 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 MIR4753-201ENST00000585119 83 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 AC079587.1-201ENST00000603846 277 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 AC113403.1-201ENST00000604910 193 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM259Q4ZIN3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 MIR367-201ENST00000362299 68 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 RNA5SP366-201ENST00000365454 123 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 RNU6-144P-201ENST00000383951 107 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 HMGN2P8-201ENST00000391458 268 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AC006461.1-201ENST00000412637 326 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 HLA-N-201ENST00000437516 135 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AL358232.1-201ENST00000448030 501 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 HMGN2P7-201ENST00000456186 273 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 RNU7-57P-201ENST00000459540 60 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AC006445.1-201ENST00000491925 405 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AC091167.1-201ENST00000492017 396 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AL592156.1-201ENST00000508758 304 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 RN7SKP21-201ENST00000516503 220 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMEM259Q4ZIN3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 AL513302.2-201ENST00000562313 1842 ntBASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 AL049781.1-201ENST00000623195 3585 ntBASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM259Q4ZIN3 MIR331-201ENST00000362302 94 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 RNU6-199P-201ENST00000362954 107 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 Y_RNA.337-201ENST00000365312 102 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AP002088.1-201ENST00000382740 395 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 MIR300-201ENST00000401138 83 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 RPL30P13-201ENST00000418873 348 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AC009414.1-201ENST00000427200 443 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AL137159.1-201ENST00000452808 512 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 SNORA25.12-201ENST00000516202 82 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 CYCSP29-201ENST00000533731 318 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AC140479.6-201ENST00000633535 357 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AC068647.2-201ENST00000637380 353 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 AC010332.2-201ENST00000613083 1904 ntBASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.71
TMEM259Q4ZIN3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AC006971.1-201ENST00000407916 4486 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 U8.7-201ENST00000364940 136 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RNU6-1027P-201ENST00000383998 107 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 SNORD14D-201ENST00000384390 87 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 MT-TT-201ENST00000387460 66 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 SNORA40-201ENST00000388090 126 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 MIR1283-1-201ENST00000408494 87 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AC117454.1-201ENST00000491120 168 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RNU6-711P-201ENST00000517255 106 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AP003730.1-201ENST00000524605 285 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 MIR5688-201ENST00000580619 83 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 ARF4P1-201ENST00000605447 541 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 MIR3653-201ENST00000625572 110 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 AC018555.1-201ENST00000567548 1980 ntBASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM259Q4ZIN3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 Y_RNA.124-201ENST00000363339 93 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 Y_RNA.172-201ENST00000363765 102 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 MIR518C-201ENST00000384822 101 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 AL139095.1-201ENST00000404326 391 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 AC114982.1-201ENST00000469402 321 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.38□□□□□ -1.71
TMEM259Q4ZIN3 AC090877.1-201ENST00000561418 344 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms