Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-245P-201ENST00000384020 107 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 Y_RNA.579-201ENST00000390939 94 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AL138885.1-201ENST00000405921 675 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AC092423.1-201ENST00000430165 186 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AC099799.1-201ENST00000439809 192 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 BX510359.1-201ENST00000456973 237 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFSF4P23510 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.7□□□□□ -1.98
TNFSF4P23510 RNU7-4P-201ENST00000516961 62 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 RNU6-667P-201ENST00000517186 102 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AC034114.1-201ENST00000520293 285 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AC007536.1-201ENST00000533382 349 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 NDUFA5P6-201ENST00000542110 379 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFSF4P23510 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFSF4P23510 TCL6_2.1-201ENST00000615162 119 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AL132822.1-201ENST00000617063 513 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 AL160413.1-201ENST00000622780 310 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
TNFSF4P23510 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFSF4P23510 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFSF4P23510 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFSF4P23510 RNU1-76P-201ENST00000362903 159 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 RNU6-280P-201ENST00000364145 104 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 Y_RNA.364-201ENST00000365532 101 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 MIR559-201ENST00000385188 96 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 SNORA26.7-201ENST00000391288 122 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 AL357139.1-201ENST00000407792 426 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 RNU2-48P-201ENST00000410694 191 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 BMS1P22-201ENST00000414726 313 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 AC027124.2-201ENST00000428249 105 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 USP9YP16-201ENST00000430287 407 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 USP9YP23-201ENST00000455085 407 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 AC107032.1-201ENST00000485945 480 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.69□□□□□ -1.98
TNFSF4P23510 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFSF4P23510 RNU5F-4P-201ENST00000516581 114 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFSF4P23510 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 MIR2682-201ENST00000580305 110 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 MIR622-201ENST00000638396 96 ntBASIC2.69□□□□□ -1.98
TNFSF4P23510 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TNFSF4P23510 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
TNFSF4P23510 ZNF204P-201ENST00000416749 2397 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFSF4P23510 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFSF4P23510 SNORD56.3-201ENST00000363507 71 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 Y_RNA.333-201ENST00000365274 102 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 SNORA18.2-201ENST00000383865 132 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 MIR487A-201ENST00000385009 80 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6-159P-201ENST00000391080 106 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU1-139P-201ENST00000391307 165 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6-1156P-201ENST00000410365 100 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFSF4P23510 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 Z75741.1-201ENST00000446793 314 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFSF4P23510 MIR2053-201ENST00000459295 91 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RPS23P5-201ENST00000495419 428 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 ANXA2P1-201ENST00000505539 926 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFSF4P23510 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6-1114P-201ENST00000516022 107 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6-120P-201ENST00000516077 103 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 RNU6-976P-201ENST00000516086 111 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFSF4P23510 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFSF4P23510 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFSF4P23510 AL442067.2-201ENST00000614033 363 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 MIR1248-201ENST00000629190 106 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.68□□□□□ -1.98
TNFSF4P23510 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFSF4P23510 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFSF4P23510 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TNFSF4P23510 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TNFSF4P23510 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
TNFSF4P23510 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFSF4P23510 Y_RNA.106-201ENST00000363189 100 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 SNORA11.1-201ENST00000408133 129 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFSF4P23510 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AP000870.1-201ENST00000472927 406 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AC027575.1-201ENST00000481064 460 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR449C-201ENST00000516047 92 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 RNU2-44P-201ENST00000516795 194 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AC091144.1-201ENST00000519573 138 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms