Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
THBS1P07996 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
THBS1P07996 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
THBS1P07996 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
THBS1P07996 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
THBS1P07996 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
THBS1P07996 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
THBS1P07996 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
THBS1P07996 RNA5SP502-201ENST00000362694 119 ntBASIC4.02□□□□□ -1.77
THBS1P07996 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
THBS1P07996 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.02□□□□□ -1.77
THBS1P07996 RNA5SP153-201ENST00000516498 76 ntBASIC4.02□□□□□ -1.77
THBS1P07996 RN7SKP21-201ENST00000516503 220 ntBASIC4.02□□□□□ -1.77
THBS1P07996 AC026241.1-201ENST00000517873 2142 ntBASIC4.02□□□□□ -1.77
THBS1P07996 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.02□□□□□ -1.77
THBS1P07996 TOMM20P2-201ENST00000540082 421 ntBASIC4.02□□□□□ -1.77
THBS1P07996 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 CYP4A43P-201ENST00000568156 121 ntBASIC4.02□□□□□ -1.77
THBS1P07996 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.02□□□□□ -1.77
THBS1P07996 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
THBS1P07996 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
THBS1P07996 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
THBS1P07996 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
THBS1P07996 RNU4-41P-201ENST00000364426 143 ntBASIC4.01□□□□□ -1.77
THBS1P07996 MIR586-201ENST00000385035 97 ntBASIC4.01□□□□□ -1.77
THBS1P07996 MIR607-201ENST00000385241 96 ntBASIC4.01□□□□□ -1.77
THBS1P07996 MIRLET7F2-201ENST00000385277 83 ntBASIC4.01□□□□□ -1.77
THBS1P07996 SNORA12.1-201ENST00000390873 148 ntBASIC4.01□□□□□ -1.77
THBS1P07996 SNORA26-201ENST00000391286 122 ntBASIC4.01□□□□□ -1.77
THBS1P07996 RPS3P1-201ENST00000456781 192 ntBASIC4.01□□□□□ -1.77
THBS1P07996 RPL23AP54-201ENST00000495129 419 ntBASIC4.01□□□□□ -1.77
THBS1P07996 AC069240.1-201ENST00000548774 375 ntBASIC4.01□□□□□ -1.77
THBS1P07996 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.01□□□□□ -1.77
THBS1P07996 RPS15AP11-201ENST00000594193 385 ntBASIC4.01□□□□□ -1.77
THBS1P07996 uc_338.28-201ENST00000612082 187 ntBASIC4.01□□□□□ -1.77
THBS1P07996 AC025166.1-201ENST00000612411 163 ntBASIC4.01□□□□□ -1.77
THBS1P07996 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
THBS1P07996 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.01□□□□□ -1.77
THBS1P07996 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.01□□□□□ -1.77
THBS1P07996 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
THBS1P07996 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4□□□□□ -1.77
THBS1P07996 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
THBS1P07996 AC011266.1-201ENST00000624119 3569 ntBASIC4□□□□□ -1.77
THBS1P07996 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
THBS1P07996 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 RNU4-15P-201ENST00000362613 141 ntBASIC4□□□□□ -1.77
THBS1P07996 SNORD114-19-201ENST00000363072 75 ntBASIC4□□□□□ -1.77
THBS1P07996 RNA5SP447-201ENST00000363749 119 ntBASIC4□□□□□ -1.77
THBS1P07996 RNA5SP175-201ENST00000364275 119 ntBASIC4□□□□□ -1.77
THBS1P07996 RNU6-19P-201ENST00000384718 107 ntBASIC4□□□□□ -1.77
THBS1P07996 MIR548A1-201ENST00000385041 97 ntBASIC4□□□□□ -1.77
THBS1P07996 MIR548B-201ENST00000385247 97 ntBASIC4□□□□□ -1.77
THBS1P07996 RNA5SP239-201ENST00000410218 129 ntBASIC4□□□□□ -1.77
THBS1P07996 HLA-N-201ENST00000437516 135 ntBASIC4□□□□□ -1.77
THBS1P07996 AC090515.1-201ENST00000465295 476 ntBASIC4□□□□□ -1.77
THBS1P07996 AC105137.1-201ENST00000484355 562 ntBASIC4□□□□□ -1.77
THBS1P07996 RPS29P20-201ENST00000489592 171 ntBASIC4□□□□□ -1.77
THBS1P07996 RNU6-126P-201ENST00000516685 103 ntBASIC4□□□□□ -1.77
THBS1P07996 AC005972.2-201ENST00000604690 348 ntBASIC4□□□□□ -1.77
THBS1P07996 AC073308.1-201ENST00000623696 305 ntBASIC4□□□□□ -1.77
THBS1P07996 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4□□□□□ -1.77
THBS1P07996 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4□□□□□ -1.77
THBS1P07996 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4□□□□□ -1.77
THBS1P07996 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
THBS1P07996 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.99□□□□□ -1.77
THBS1P07996 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
THBS1P07996 SNORD73B-201ENST00000364394 72 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AL133412.1-201ENST00000380194 2992 ntBASIC3.99□□□□□ -1.77
THBS1P07996 RNU6-484P-201ENST00000384016 107 ntBASIC3.99□□□□□ -1.77
THBS1P07996 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
THBS1P07996 SNORA11F-201ENST00000408237 128 ntBASIC3.99□□□□□ -1.77
THBS1P07996 U6atac.2-201ENST00000408644 118 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
THBS1P07996 MTATP6P21-201ENST00000440681 189 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AL358232.1-201ENST00000448030 501 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AC023449.1-201ENST00000454464 154 ntBASIC3.99□□□□□ -1.77
THBS1P07996 RPL35AP15-201ENST00000468042 339 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AC145146.1-201ENST00000496370 254 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AC078918.1-201ENST00000498515 228 ntBASIC3.99□□□□□ -1.77
THBS1P07996 PARP4P3-201ENST00000510265 317 ntBASIC3.99□□□□□ -1.77
THBS1P07996 RNU6-1337P-201ENST00000516525 95 ntBASIC3.99□□□□□ -1.77
THBS1P07996 IFITM8P-201ENST00000522529 394 ntBASIC3.99□□□□□ -1.77
THBS1P07996 RMST_8.1-201ENST00000610287 165 ntBASIC3.99□□□□□ -1.77
THBS1P07996 uc_338.13-201ENST00000618243 179 ntBASIC3.99□□□□□ -1.77
THBS1P07996 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.99□□□□□ -1.77
THBS1P07996 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms