Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC092268.1-201ENST00000342691 405 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RNA5SP42-201ENST00000364278 115 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.446-201ENST00000384178 104 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-918P-201ENST00000391219 106 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-493P-201ENST00000391321 108 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-1001P-201ENST00000411265 100 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 COTL1P1-201ENST00000422309 375 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AL606753.1-201ENST00000427435 87 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 WARS2P1-201ENST00000429678 537 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC074198.2-201ENST00000508153 258 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.679-201ENST00000516416 91 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC021231.3-201ENST00000558497 370 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 MIR5695-201ENST00000579717 85 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC008749.1-201ENST00000597650 306 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 AC073349.3-201ENST00000617616 186 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 USP8P1-201ENST00000494673 3183 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 MFSD8-233ENST00000641482 4860 ntBASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-704P-201ENST00000364162 103 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-1175P-201ENST00000365200 107 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-301P-201ENST00000384277 107 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-394P-201ENST00000410735 107 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AP001324.2-201ENST00000461163 319 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RPS4XP22-201ENST00000480755 780 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AP005660.1-201ENST00000522972 293 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 NACAP3-201ENST00000552100 481 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC021753.1-201ENST00000635724 168 ntBASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.57□□□□□ -1.84
HCFC2Q9Y5Z7 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 SNORD56.1-201ENST00000362913 68 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-961P-201ENST00000363893 105 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-487P-201ENST00000365430 104 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.418-201ENST00000384029 102 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNU4-47P-201ENST00000410876 114 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-651P-201ENST00000411040 105 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 GPM6BP3-201ENST00000442797 145 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AC006445.1-201ENST00000491925 405 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNU7-200P-201ENST00000516105 62 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 RNA5SP468-201ENST00000516782 93 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 SNORA31.23-201ENST00000517219 133 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AC233702.2-202ENST00000562547 291 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 MIR4644-201ENST00000579929 84 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AC022441.3-201ENST00000605737 136 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HCFC2Q9Y5Z7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MIR422A-201ENST00000362286 90 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 SNORA80A-201ENST00000363922 136 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 RNA5SP189-201ENST00000364920 115 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-1289P-201ENST00000384431 106 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 POLR2KP2-201ENST00000438155 177 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC091021.1-201ENST00000468051 388 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AP001025.1-201ENST00000486139 332 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms