Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 COX6CP6-201ENST00000490840 228 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 RN7SL558P-201ENST00000497468 299 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 RNA5SP236-201ENST00000516169 116 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 AP003730.1-201ENST00000524605 285 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 RPS15AP11-201ENST00000594193 385 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 AL365205.2-201ENST00000594586 68 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 MIR7703-201ENST00000620784 77 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 MIR3199-2-201ENST00000636243 86 ntBASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PCDHB3Q9Y5E6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PCDHB3Q9Y5E6 AC004944.1-201ENST00000517807 3059 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC125257.1-201ENST00000560400 2930 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 RNU6-271P-201ENST00000363858 105 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 MIR590-201ENST00000385008 97 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 SNORA26-201ENST00000391286 122 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 RPL18P10-201ENST00000425606 538 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC010531.2-201ENST00000465012 153 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 RN7SL817P-201ENST00000480777 288 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 ATP5EP1-201ENST00000510257 156 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 RNU6-928P-201ENST00000516876 104 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 RNU6-709P-201ENST00000517257 104 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC134698.5-201ENST00000519444 336 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC069200.1-201ENST00000609511 323 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 MIR6758-201ENST00000620653 63 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 AC103988.1-201ENST00000566382 2177 ntBASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB3Q9Y5E6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AL589743.1-201ENST00000551932 2712 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 RNU6-1010P-201ENST00000362757 107 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 SNORA70.2-201ENST00000364506 135 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AL139095.1-201ENST00000404326 391 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AL162591.2-201ENST00000449634 317 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 RPS3P1-201ENST00000456781 192 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC105137.1-201ENST00000484355 562 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 RNU1-6P-201ENST00000516290 144 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 RNU6-63P-201ENST00000516690 95 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 HSPE1P18-201ENST00000517602 280 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AL110118.1-201ENST00000553543 400 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 FAM35BP-202ENST00000497389 3337 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
PCDHB3Q9Y5E6 AL133243.3-201ENST00000617415 3004 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 HMGN2P9-201ENST00000476875 229 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 AC007751.1-201ENST00000529260 376 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 RPL23AP91-201ENST00000569211 455 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 MIR5699-201ENST00000578903 90 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 AC091979.2-201ENST00000607514 214 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 AL022401.1-201ENST00000619498 108 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 AC007656.2-201ENST00000624902 4547 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 MAPK10-303ENST00000641324 3959 ntBASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB3Q9Y5E6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 AL590240.1-201ENST00000334118 313 ntBASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 MIR494-201ENST00000349529 81 ntBASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 RNU1-20P-201ENST00000363314 162 ntBASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 SNORA7.2-201ENST00000364446 145 ntBASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 MIR708-201ENST00000390708 88 ntBASIC4.55□□□□□ -1.68
PCDHB3Q9Y5E6 RNA5SP372-201ENST00000390836 115 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms