Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-78P-201ENST00000362897 107 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-961P-201ENST00000363893 105 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU4-56P-201ENST00000364700 142 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-449P-201ENST00000383914 107 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.400-201ENST00000383963 111 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-166P-201ENST00000384371 107 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR34A-201ENST00000385130 110 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 RNA5SP171-201ENST00000391071 115 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 TOMM22P1-201ENST00000418578 312 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL353705.1-201ENST00000433468 480 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 snoU13.24-201ENST00000458998 104 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC117440.1-201ENST00000474107 571 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AF186996.7-201ENST00000492781 209 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 HMGB1P22-201ENST00000505315 124 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 HMGB3P3-201ENST00000510526 400 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 SNORA70.19-201ENST00000516717 90 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL645944.1-201ENST00000603857 493 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC019176.2-201ENST00000611579 315 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL121772.2-201ENST00000614331 297 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AC034229.5-201ENST00000624258 185 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL109809.4-201ENST00000603520 2185 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 AL049781.1-201ENST00000623195 3585 ntBASIC3.36□□□□□ -1.87
TSC22D4Q9Y3Q8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AC116096.1-201ENST00000566804 2314 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 DEFB108F-201ENST00000344638 222 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.136-201ENST00000363444 102 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.215-201ENST00000364204 112 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.261-201ENST00000364631 102 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.262-201ENST00000364641 102 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-215P-201ENST00000365169 102 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-1175P-201ENST00000365200 107 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR554-201ENST00000384874 96 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 SNORA46.1-201ENST00000391069 153 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU1-139P-201ENST00000391307 165 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AL357139.1-201ENST00000407792 426 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AL445584.1-201ENST00000431451 330 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 POLR2KP2-201ENST00000438155 177 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 snoU13.4-201ENST00000458916 104 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-1114P-201ENST00000516022 107 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 SNORD116-25-201ENST00000516517 92 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-572P-201ENST00000516724 80 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR4782-201ENST00000577987 79 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RMST_6.1-201ENST00000611980 203 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AC006001.4-201ENST00000622243 395 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 AC009093.8-201ENST00000641769 292 ntBASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TSC22D4Q9Y3Q8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC093908.1-201ENST00000623125 8092 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 Y_RNA.245-201ENST00000364493 95 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR487A-201ENST00000385009 80 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-257P-201ENST00000410238 98 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 RNU6-1001P-201ENST00000411265 100 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 RAB9AP3-201ENST00000412737 573 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 Z85995.1-201ENST00000415547 335 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC096638.1-201ENST00000444678 216 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 RAB9AP1-201ENST00000449393 573 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC092798.1-201ENST00000458542 409 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC091874.1-201ENST00000511402 339 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 UBL5P4-201ENST00000562584 236 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 MIR5695-201ENST00000579717 85 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.34□□□□□ -1.87
TSC22D4Q9Y3Q8 AC005296.1-201ENST00000616145 209 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms