Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL359314.1-201ENST00000616913 261 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 MIR6863-201ENST00000636112 90 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC008555.8-201ENST00000623602 2168 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC092268.1-201ENST00000342691 405 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 RNU4-15P-201ENST00000362613 141 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 RNU6-1085P-201ENST00000363576 107 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SNORD32A-201ENST00000364805 84 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 RN7SKP61-201ENST00000410642 295 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AL590135.1-201ENST00000422215 156 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC019205.3-201ENST00000424573 156 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 USP9YP14-201ENST00000430663 563 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC016700.2-201ENST00000446011 156 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 TPTE2P5-203ENST00000458118 728 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC087884.1-201ENST00000469738 328 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC015911.1-201ENST00000495111 156 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC009646.1-201ENST00000510455 318 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP401-201ENST00000515920 127 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SNORA14.1-201ENST00000516113 141 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 RNU6-189P-201ENST00000516120 101 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 TRAV32-201ENST00000553993 340 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 VN1R80P-201ENST00000597126 338 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SDR42E1P4-201ENST00000620894 481 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 OR5AK4P-201ENST00000635912 903 ntBASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLCF1Q9UBD9 SNORD115-3-201ENST00000363100 82 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 RNU6-743P-201ENST00000364151 106 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 RNU4-66P-201ENST00000365199 138 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 SNORA69-201ENST00000383895 132 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 Y_RNA.409-201ENST00000383990 98 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 SNORD14D-201ENST00000384390 87 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL512604.1-201ENST00000404812 257 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 SUMO2P12-201ENST00000405924 140 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP450-201ENST00000411206 102 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 TIMM9P3-201ENST00000428659 274 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL133396.1-201ENST00000432048 687 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 MTCO2P3-201ENST00000442543 421 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC132942.1-201ENST00000486753 483 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC145146.1-201ENST00000496370 254 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC107401.1-201ENST00000503426 685 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC016632.1-201ENST00000503994 196 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC091885.1-201ENST00000506658 268 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 CENPUP1-201ENST00000526649 1202 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC024909.2-201ENST00000553035 286 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 MIR4287-201ENST00000579398 78 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AP000654.2-201ENST00000605633 586 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AC124864.2-201ENST00000624736 186 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 ZNF702P-202ENST00000434269 1966 ntBASIC1.56□□□□□ -2.16
CLCF1Q9UBD9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP213-201ENST00000391031 106 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 MTCO3P40-201ENST00000392516 676 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 MIR1262-201ENST00000408276 93 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 RNU2-16P-201ENST00000410712 136 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 RPL23AP95-201ENST00000426806 265 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 MTATP6P26-201ENST00000445926 662 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AP001836.1-201ENST00000604675 523 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC103705.1-201ENST00000619013 241 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AC048344.4-201ENST00000619744 527 ntBASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLCF1Q9UBD9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 SNORD32B-201ENST00000364460 84 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms