Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU6-1322P-201ENST00000364309 107 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RNU6-546P-201ENST00000383991 107 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RNU6-483P-201ENST00000384088 108 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RNU6-692P-201ENST00000384496 107 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2□□□□□ -2.09
HPS4Q9NQG7 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AL590002.1-201ENST00000406554 418 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AL606923.1-201ENST00000406616 190 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2□□□□□ -2.09
HPS4Q9NQG7 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2□□□□□ -2.09
HPS4Q9NQG7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2□□□□□ -2.09
HPS4Q9NQG7 AC003989.2-201ENST00000440224 169 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RPL23AP63-201ENST00000498752 471 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 CCDC34P1-201ENST00000507441 517 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RNA5SP401-201ENST00000515920 127 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 RNU5F-2P-201ENST00000516066 82 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 COPS8P3-201ENST00000526024 482 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2□□□□□ -2.09
HPS4Q9NQG7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2□□□□□ -2.09
HPS4Q9NQG7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2□□□□□ -2.09
HPS4Q9NQG7 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 MIR4424-201ENST00000585257 86 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AP000942.3-201ENST00000603702 160 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 AC107304.1-201ENST00000604229 296 ntBASIC2□□□□□ -2.09
HPS4Q9NQG7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 RNU4-20P-201ENST00000365601 151 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 RPS29P13-201ENST00000402041 169 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AL117339.3-201ENST00000418733 162 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 RPS15AP10-201ENST00000432472 382 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 MTND3P21-201ENST00000433774 331 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 MTND1P4-201ENST00000435196 415 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 MTND1P34-201ENST00000438556 671 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AL031274.1-201ENST00000450334 232 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 PMCHL2-203ENST00000457791 237 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC069113.1-201ENST00000517763 267 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC115990.1-201ENST00000526957 301 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 VN1R107P-201ENST00000601784 209 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC080078.2-201ENST00000603766 501 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC009314.1-201ENST00000603871 304 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC063943.3-201ENST00000615562 356 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 DUXAP9-208ENST00000622815 614 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC068137.3-201ENST00000639191 341 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC073869.6-201ENST00000640656 341 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
HPS4Q9NQG7 AC027514.1-201ENST00000588561 1603 ntBASIC1.99□□□□□ -2.09
HPS4Q9NQG7 RNU6-827P-201ENST00000365553 106 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 MIR181A1-201ENST00000385026 110 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU6-648P-201ENST00000410190 107 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.599-201ENST00000410489 109 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.619-201ENST00000410951 90 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU6-1068P-201ENST00000410958 103 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 TIMM9P3-201ENST00000428659 274 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU6-261P-201ENST00000459506 102 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AC087884.1-201ENST00000469738 328 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU6-1281P-201ENST00000516223 105 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 CYCSP27-201ENST00000527643 293 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AC022616.8-201ENST00000533569 253 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AC090115.3-201ENST00000553218 849 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AC103996.1-201ENST00000555468 102 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AL118558.2-201ENST00000556294 238 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AC026271.5-201ENST00000577873 130 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 RNU6-85P-201ENST00000605989 107 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AL132822.1-201ENST00000617063 513 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
HPS4Q9NQG7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.98□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.6-201ENST00000362350 114 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.38-201ENST00000362617 102 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 RNU4-12P-201ENST00000365233 139 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 RNU6-43P-201ENST00000384302 107 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.481-201ENST00000384373 102 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 SNORA17.3-201ENST00000391159 129 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 AL356432.1-201ENST00000405809 419 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 RNU6-908P-201ENST00000410160 94 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 AL121601.2-201ENST00000438019 707 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 AL137159.1-201ENST00000452808 512 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 SNRPGP7-201ENST00000469016 106 ntBASIC1.97□□□□□ -2.09
HPS4Q9NQG7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.97□□□□□ -2.09
HPS4Q9NQG7 RNU6-718P-201ENST00000516166 105 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms