Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 Y_RNA.528-201ENST00000384575 108 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 MIR1911-201ENST00000410783 80 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AC004866.1-201ENST00000411748 78 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AL157831.1-201ENST00000426134 473 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AL691449.1-201ENST00000426570 421 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AL445687.1-201ENST00000439946 251 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 RNU7-115P-201ENST00000516433 55 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AC025647.1-201ENST00000517879 253 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.14□□□□□ -1.59
NBPF3Q9H094 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.14□□□□□ -1.59
NBPF3Q9H094 AC015720.1-201ENST00000565251 277 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.14□□□□□ -1.59
NBPF3Q9H094 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.14□□□□□ -1.59
NBPF3Q9H094 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NBPF3Q9H094 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NBPF3Q9H094 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NBPF3Q9H094 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NBPF3Q9H094 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.13□□□□□ -1.59
NBPF3Q9H094 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 RNA5SP235-201ENST00000365411 114 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AL133412.1-201ENST00000380194 2992 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 RNU6-1014P-201ENST00000383940 103 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 RNU6-484P-201ENST00000384016 107 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 RNU6-972P-201ENST00000391208 107 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 SNORD66.1-201ENST00000391230 76 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 U3.26-201ENST00000391236 204 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 PTMAP2-201ENST00000397627 327 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC126124.2-201ENST00000413542 321 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.13□□□□□ -1.59
NBPF3Q9H094 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC125238.1-201ENST00000448842 249 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC010531.2-201ENST00000465012 153 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.13□□□□□ -1.59
NBPF3Q9H094 RNU1-117P-201ENST00000517041 158 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC140479.6-201ENST00000633535 357 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NBPF3Q9H094 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 AC087190.4-201ENST00000574616 8334 ntBASIC5.13□□□□□ -1.59
NBPF3Q9H094 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NBPF3Q9H094 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NBPF3Q9H094 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NBPF3Q9H094 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 MIR383-201ENST00000362257 73 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 MIR208A-201ENST00000362287 71 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 Y_RNA.221-201ENST00000364248 96 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 RNU6-629P-201ENST00000384061 103 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 MIR3074-201ENST00000384885 81 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 RNA5SP372-201ENST00000390836 115 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 AL590004.2-201ENST00000404787 371 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.12□□□□□ -1.59
NBPF3Q9H094 AC108022.1-201ENST00000493466 478 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 RNA5SP49-201ENST00000516450 115 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 CKS1BP7-201ENST00000522230 235 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 SNORD11B-201ENST00000607707 90 ntBASIC5.12□□□□□ -1.59
NBPF3Q9H094 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.12□□□□□ -1.59
NBPF3Q9H094 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NBPF3Q9H094 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 AC106871.1-201ENST00000568324 3102 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 ADAM3A-203ENST00000461344 2157 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNA5SP513-201ENST00000364648 118 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNA5SP22-201ENST00000365393 109 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNA5SP283-201ENST00000365604 119 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNU6-1124P-201ENST00000384169 107 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNU6-140P-201ENST00000384566 108 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 RNA5SP504-201ENST00000410676 117 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 AC005300.1-201ENST00000428401 373 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 TOMM22P2-201ENST00000430735 237 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 S100A11P1-201ENST00000477525 312 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 ATP5EP1-201ENST00000510257 156 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 IGLV3-26-201ENST00000520756 302 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.11□□□□□ -1.59
NBPF3Q9H094 MIR3944-201ENST00000581277 108 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 AL035470.1-201ENST00000622571 220 ntBASIC5.11□□□□□ -1.59
NBPF3Q9H094 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NBPF3Q9H094 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms