Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNU6-972P-201ENST00000391208 107 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AC012308.1-201ENST00000451232 178 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AC021205.2-201ENST00000480069 347 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 ATP5EP1-201ENST00000510257 156 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP249-201ENST00000516127 99 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AL359198.2-201ENST00000611836 194 ntBASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTNAP3Q9BZ76 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP189-201ENST00000364920 115 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 Y_RNA.323-201ENST00000365157 109 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 SNORA18.3-201ENST00000384122 132 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 SNORA48.2-201ENST00000390926 124 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 MIR1255A-201ENST00000408338 113 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 AC009238.2-201ENST00000431026 355 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 RNA5SP468-201ENST00000516782 93 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 RNU6-158P-201ENST00000517104 100 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 AL160236.1-201ENST00000556317 195 ntBASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP3Q9BZ76 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.28□□□□□ -1.73
CNTNAP3Q9BZ76 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
CNTNAP3Q9BZ76 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RNU6-1296P-201ENST00000383879 107 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 U3.32-201ENST00000408116 212 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC126124.2-201ENST00000413542 321 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC244670.1-201ENST00000436879 112 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AL450023.3-201ENST00000440592 271 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RPL39P34-201ENST00000477141 156 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RPL31P41-201ENST00000477967 372 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RN7SL441P-201ENST00000492388 296 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 RMST_8.1-201ENST00000610287 165 ntBASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP3Q9BZ76 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 Y_RNA.244-201ENST00000364484 109 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 RNU6-484P-201ENST00000384016 107 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 RNVU1-14-201ENST00000384770 164 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 VDAC1P3-201ENST00000434069 851 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 RNU6-109P-201ENST00000516364 107 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 RNU6-184P-201ENST00000516514 107 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 RNU6-107P-201ENST00000516643 102 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 CKS1BP7-201ENST00000522230 235 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 AC113403.1-201ENST00000604910 193 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 AL022345.2-201ENST00000606307 135 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 SNORD115-40-201ENST00000606510 82 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 MALAT1.1-201ENST00000618249 95 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 AC140113.4-201ENST00000622087 222 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 MIR3529-201ENST00000637713 78 ntBASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CNTNAP3Q9BZ76 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms