Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC140059.1-201ENST00000489238 361 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AC093023.1-201ENST00000547375 507 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AC010620.2-201ENST00000600135 313 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AL670379.2-201ENST00000604983 252 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 ZNF204P-201ENST00000416749 2397 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RNU1-72P-201ENST00000362976 153 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.176-201ENST00000363815 109 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RNU6-281P-201ENST00000384212 103 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 MIR568-201ENST00000385036 95 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 SNORA48.8-201ENST00000391324 134 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RNU6-1001P-201ENST00000411265 100 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 BX322639.1-202ENST00000423987 2213 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AL513302.2-201ENST00000562313 1842 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 MIR3199-1-201ENST00000582434 88 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AL121655.1-201ENST00000605811 308 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AC099778.2-201ENST00000610904 211 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 MIR7157-201ENST00000635801 60 ntBASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM55Q9BYV6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.47-201ENST00000362697 108 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 U3.9-201ENST00000363823 204 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-280P-201ENST00000364145 104 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-805P-201ENST00000365643 106 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-463P-201ENST00000384340 107 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.574-201ENST00000384766 95 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 MIR218-1-201ENST00000384999 110 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 SNORD78.2-201ENST00000391076 69 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-1109P-201ENST00000391187 107 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 U3.39-201ENST00000408569 239 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AC112220.1-201ENST00000434628 355 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RPL23AP58-201ENST00000440453 469 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 FCF1P4-201ENST00000448326 183 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RN7SL293P-201ENST00000481765 281 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AC103975.1-201ENST00000482506 483 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-397P-201ENST00000516226 104 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 SNORA74D-201ENST00000516404 141 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 SCARNA3-201ENST00000517097 143 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 SNORA70.24-201ENST00000517233 118 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AL356575.1-201ENST00000603008 283 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TRIM55Q9BYV6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AC080128.1-201ENST00000474389 1917 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.276-201ENST00000364732 109 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 RNA5SP51-201ENST00000364750 119 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.458-201ENST00000384240 102 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 RNU6-196P-201ENST00000384315 107 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 RPL21P1-201ENST00000399532 476 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 RNU6-130P-201ENST00000411112 103 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 RPS12P18-201ENST00000442381 270 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AC067942.3-201ENST00000512025 362 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 COX6CP5-201ENST00000527162 228 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 MIR5187-201ENST00000583479 76 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 7SK.10-201ENST00000621414 298 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 AC090517.3-201ENST00000625170 141 ntBASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM55Q9BYV6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 RNU6-238P-201ENST00000363313 106 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 SET-203ENST00000372688 801 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms