Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC134878.1-201ENST00000619901 243 ntBASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 AC022893.2-201ENST00000564832 3296 ntBASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSBP4Q9BWG4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC058791.1-201ENST00000608412 3198 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 SNORA7.2-201ENST00000364446 145 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-1152P-201ENST00000384576 107 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC007064.1-201ENST00000412238 351 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AL772161.1-201ENST00000439130 476 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC080013.2-201ENST00000460866 323 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC084357.1-201ENST00000473404 255 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RN7SL244P-201ENST00000493405 297 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 PPBPP1-201ENST00000510807 373 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-109P-201ENST00000516364 107 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-184P-201ENST00000516514 107 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-113P-201ENST00000516653 101 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RNU6-928P-201ENST00000516876 104 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AP003730.1-201ENST00000524605 285 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 RPL23AP91-201ENST00000569211 455 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AL365205.2-201ENST00000594586 68 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 Y_RNA.818-201ENST00000618813 71 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AC112200.1-201ENST00000625015 234 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AL136164.3-201ENST00000624429 3978 ntBASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP4Q9BWG4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MIR494-201ENST00000349529 81 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNA5SP510-201ENST00000364697 99 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNU6-748P-201ENST00000384648 107 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MIR181A2-201ENST00000384863 110 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 HSPE1P12-201ENST00000412576 301 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RBMY2UP-201ENST00000453474 324 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC010531.2-201ENST00000465012 153 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 COX6B1P5-201ENST00000509843 249 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC010598.1-201ENST00000510378 103 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNA5SP43-201ENST00000516559 110 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNU6-365P-201ENST00000517113 106 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC011602.1-201ENST00000546484 331 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MIR4662B-201ENST00000579498 81 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RPL17P51-201ENST00000605218 238 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 SNORD115-40-201ENST00000606510 82 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 Pinc.1-201ENST00000616452 154 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MIR6861-201ENST00000618657 64 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MIR6837-201ENST00000620884 64 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 AL035470.1-201ENST00000622571 220 ntBASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP4Q9BWG4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 AP001486.2-201ENST00000561652 5113 ntBASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 SNORA51.4-201ENST00000364993 124 ntBASIC3.51□□□□□ -1.85
SSBP4Q9BWG4 RNU6-1134P-201ENST00000365156 101 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms