Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
HHIPQ96QV1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HHIPQ96QV1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HHIPQ96QV1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HHIPQ96QV1 RNA5SP502-201ENST00000362694 119 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 Y_RNA.412-201ENST00000384001 104 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 SNORA9-201ENST00000384215 133 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 PTGES3P4-201ENST00000426243 356 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 snoU13.14-201ENST00000459372 104 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 RNU6-313P-201ENST00000516317 112 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 RNU6-344P-201ENST00000516635 111 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 AP002001.1-203ENST00000534002 267 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 AL034555.1-201ENST00000604816 211 ntBASIC3.99□□□□□ -1.77
HHIPQ96QV1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HHIPQ96QV1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HHIPQ96QV1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNA5SP399-201ENST00000364003 117 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 Y_RNA.215-201ENST00000364204 112 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNU6-275P-201ENST00000364910 107 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HHIPQ96QV1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 MIR491-201ENST00000384877 84 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 CBX3P9-201ENST00000402326 552 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U3.40-201ENST00000408706 208 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNU2-2P-201ENST00000410396 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 RPS29P4-201ENST00000414733 161 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 EBAG9P1-201ENST00000418955 543 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC245291.1-201ENST00000419501 328 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RPL23AP82-202ENST00000427528 469 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 AL441985.1-201ENST00000457727 251 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 Y_RNA.637-201ENST00000459424 114 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RPL32P34-201ENST00000486380 400 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC100767.1-201ENST00000528178 123 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 YPEL5P3-201ENST00000547227 352 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 MIR3684-201ENST00000579779 74 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNU2-4P-201ENST00000606190 192 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.15-201ENST00000611544 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.16-201ENST00000613119 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.12-201ENST00000613778 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.9-201ENST00000615427 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.11-201ENST00000616345 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.2-201ENST00000616535 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.3-201ENST00000617785 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.19-201ENST00000618602 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNU2-1-201ENST00000618664 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.6-201ENST00000619225 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.5-201ENST00000619465 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 U2.10-201ENST00000620268 191 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC091895.1-201ENST00000624494 256 ntBASIC3.98□□□□□ -1.77
HHIPQ96QV1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.98□□□□□ -1.77
HHIPQ96QV1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HHIPQ96QV1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HHIPQ96QV1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HHIPQ96QV1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HHIPQ96QV1 Y_RNA.182-201ENST00000363880 111 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 Y_RNA.329-201ENST00000365209 107 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 RNU6-131P-201ENST00000391144 107 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 RPL23AP48-201ENST00000406913 488 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.97□□□□□ -1.77
HHIPQ96QV1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.97□□□□□ -1.77
HHIPQ96QV1 RN7SKP164-201ENST00000516138 266 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 RNU6-436P-201ENST00000516171 114 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 SNORA70.24-201ENST00000517233 118 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 MIR3200-201ENST00000580767 85 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 AC025946.2-201ENST00000603398 234 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.97□□□□□ -1.77
HHIPQ96QV1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HHIPQ96QV1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HHIPQ96QV1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HHIPQ96QV1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.97□□□□□ -1.77
HHIPQ96QV1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HHIPQ96QV1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
HHIPQ96QV1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HHIPQ96QV1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HHIPQ96QV1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HHIPQ96QV1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HHIPQ96QV1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HHIPQ96QV1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HHIPQ96QV1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HHIPQ96QV1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HHIPQ96QV1 RNU6-727P-201ENST00000363592 107 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms