Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 OR4H12P-201ENST00000556269 907 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AC023824.2-201ENST00000566185 400 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MIR4282-201ENST00000583613 67 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MIR8076-201ENST00000611401 83 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MIR7106-201ENST00000612419 65 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AC240442.1-201ENST00000616055 283 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MIR4275-201ENST00000636486 87 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 U3.6-201ENST00000363622 211 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-7-201ENST00000364784 107 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-8-201ENST00000365467 107 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-959P-201ENST00000384671 107 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA12.2-201ENST00000391040 156 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 AL096701.2-201ENST00000416920 238 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 SSXP9-201ENST00000417503 292 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 ARF4P2-201ENST00000430209 526 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RPL26P6-201ENST00000440913 438 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 AL135938.1-201ENST00000443141 297 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RPL23AP14-201ENST00000468281 468 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 AC074133.1-201ENST00000515696 183 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 RNA5SP217-201ENST00000515959 91 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 AL590705.4-201ENST00000532209 134 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 AC009314.1-201ENST00000603871 304 ntBASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SH3RF3Q8TEJ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 BX322639.1-202ENST00000423987 2213 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-384P-201ENST00000364900 104 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA22C-201ENST00000384614 134 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA53-201ENST00000391141 249 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 BMS1P22-201ENST00000414726 313 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 RPS29P27-201ENST00000463711 170 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA31.18-201ENST00000517043 134 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA31.22-201ENST00000517204 135 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 AC006111.3-201ENST00000622137 383 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 AC009812.4-201ENST00000569134 1805 ntBASIC3.56□□□□□ -1.84
SH3RF3Q8TEJ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 SNORD56.3-201ENST00000363507 71 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.304-201ENST00000365011 112 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 SNORD56-201ENST00000413522 71 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 TRAV37-201ENST00000553906 342 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 AC104581.2-201ENST00000572227 430 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 AC011476.5-201ENST00000615594 130 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 MIR6076-201ENST00000617521 113 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.55□□□□□ -1.84
SH3RF3Q8TEJ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-37P-201ENST00000362692 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU4-90P-201ENST00000362773 141 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA5B-201ENST00000363786 132 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-11P-201ENST00000364234 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-827P-201ENST00000365553 106 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-25P-201ENST00000383873 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-1-201ENST00000383898 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-36P-201ENST00000384172 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-4P-201ENST00000384205 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-5P-201ENST00000384238 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SNORD63-201ENST00000384262 68 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-3P-201ENST00000384314 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms