Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU6-629P-201ENST00000384061 103 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-383P-201ENST00000410864 94 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 RNU2-55P-201ENST00000411146 174 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-592P-201ENST00000411333 103 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AL445584.1-201ENST00000431451 330 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-1146P-201ENST00000516282 102 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 SNORA74D-201ENST00000516404 141 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AC025647.1-201ENST00000517879 253 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 CKS1BP7-201ENST00000522230 235 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 HSPE1P5-201ENST00000561489 272 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AC090132.2-201ENST00000615881 347 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AC134878.1-201ENST00000619901 243 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AL133243.3-201ENST00000617415 3004 ntBASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AC000123.3-201ENST00000624029 4975 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RNU1-15P-201ENST00000353977 144 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 Y_RNA.415-201ENST00000384012 112 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-813P-201ENST00000384691 107 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 MIR491-201ENST00000384877 84 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 HDGFP1-201ENST00000405943 252 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 NDUFS5P4-201ENST00000412983 318 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RPL21P10-201ENST00000463521 490 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RPL31P41-201ENST00000477967 372 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AC006517.1-201ENST00000480485 328 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RN7SKP43-201ENST00000516173 320 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-107P-201ENST00000516643 102 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 PRELID2P1-201ENST00000552837 301 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 CYP4A27P-201ENST00000567218 190 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 SNRPGP15-201ENST00000600149 222 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AL137843.1-201ENST00000605078 385 ntBASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-3Q8TAU0 MAPK10-253ENST00000641010 4072 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 Y_RNA.220-201ENST00000364244 109 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-309P-201ENST00000364573 106 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 SNORA51.10-201ENST00000384418 136 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 MIR634-201ENST00000385208 97 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC079780.1-201ENST00000428259 207 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC006011.1-201ENST00000442758 349 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AL500522.2-201ENST00000448562 343 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 RPS29P19-201ENST00000479709 171 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 HMGB1P22-201ENST00000505315 124 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AL592156.1-201ENST00000508758 304 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 RNA5SP281-201ENST00000516504 135 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC007012.1-201ENST00000567192 175 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC020895.1-201ENST00000595362 272 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AL606490.9-201ENST00000603331 271 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 AC012468.1-201ENST00000604888 430 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 MIR7154-201ENST00000620673 73 ntBASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-3Q8TAU0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 SNORD12C-201ENST00000386307 89 ntBASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 RPS4XP2-201ENST00000458402 793 ntBASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 RNA5SP246-201ENST00000458909 119 ntBASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-94P-201ENST00000607728 107 ntBASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 AC012314.7-201ENST00000619693 93 ntBASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-3Q8TAU0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms