Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AC068647.1-201ENST00000489539 2265 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC092268.1-201ENST00000342691 405 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 RNU1-62P-201ENST00000362599 164 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 RNU6-508P-201ENST00000363231 103 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.114-201ENST00000363265 113 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.116-201ENST00000363292 103 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 SNORD87-201ENST00000364849 89 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 U8.6-201ENST00000364939 135 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.368-201ENST00000365547 113 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 RNU6-1264P-201ENST00000383891 107 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 RNY4P29-201ENST00000410801 97 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC004866.1-201ENST00000411748 78 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 MLLT10P1-201ENST00000418346 262 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC019205.3-201ENST00000424573 156 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC125238.1-201ENST00000448842 249 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 RN7SL93P-201ENST00000463035 293 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC090525.1-201ENST00000479116 478 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC103975.1-201ENST00000482506 483 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 AC006199.1-201ENST00000548728 219 ntBASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXR1Q6PIV2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 U3.9-201ENST00000363823 204 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.341-201ENST00000365341 102 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 RNA5SP366-201ENST00000365454 123 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 SNORA18.3-201ENST00000384122 132 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 SNORA20B-201ENST00000384220 132 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 MIR548A1-201ENST00000385041 97 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.622-201ENST00000411091 108 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AL031737.1-201ENST00000450125 223 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 HMGB1P22-201ENST00000505315 124 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 AC090142.3-201ENST00000519012 385 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 MIR6134-201ENST00000617606 109 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 MIR3653-201ENST00000625572 110 ntBASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXR1Q6PIV2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AC004925.1-201ENST00000624256 2706 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 MIR331-201ENST00000362302 94 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNU6-905P-201ENST00000384434 107 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNA5SP317-201ENST00000410176 116 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNA5SP311-201ENST00000411290 116 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AC244098.2-201ENST00000422068 99 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AC092047.1-201ENST00000424997 240 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNA5SP315-201ENST00000516340 116 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNU6-781P-201ENST00000516377 101 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 RNA5SP312-201ENST00000517068 116 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 MIR4724-201ENST00000579485 89 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 U7.8-201ENST00000619968 63 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 AL596211.1-201ENST00000569873 2277 ntBASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
FOXR1Q6PIV2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 RNU1-132P-201ENST00000364300 164 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 RNU6-178P-201ENST00000384631 104 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 RNU4-43P-201ENST00000410628 137 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 RNU6-762P-201ENST00000517107 102 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AP003730.1-201ENST00000524605 285 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 MIR4429-201ENST00000580105 73 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 FTX_3.1-201ENST00000610451 147 ntBASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FOXR1Q6PIV2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms