Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU6-793P-201ENST00000384233 104 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RNU6-22P-201ENST00000384355 107 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RNU6-959P-201ENST00000384671 107 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 SNORD17-201ENST00000390930 237 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 MIR320B2-201ENST00000408479 138 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RAB28P5-201ENST00000427490 651 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 VDAC1P3-201ENST00000434069 851 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 AC009237.7-201ENST00000447357 229 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RPL39P29-201ENST00000447779 157 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RPL26P9-201ENST00000457466 433 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 snoU13.6-201ENST00000458785 104 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 RPS27AP10-201ENST00000496103 208 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL13A1Q5TAT6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.4-201ENST00000362333 112 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 RNA5SP189-201ENST00000364920 115 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.400-201ENST00000383963 111 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.497-201ENST00000384447 98 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 RNU6-417P-201ENST00000384712 107 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 RNU5E-9P-201ENST00000411164 104 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 HMGN2P10-201ENST00000448085 265 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AP000705.1-201ENST00000454567 350 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 snoU13.23-201ENST00000458863 104 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AC084357.1-201ENST00000473404 255 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AC005921.1-201ENST00000510589 286 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 VWA8P1-201ENST00000510889 176 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 RNU5F-8P-201ENST00000515941 111 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 AC092435.4-201ENST00000623012 4159 ntBASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
COL13A1Q5TAT6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 RNU6-1272P-201ENST00000362776 107 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.488-201ENST00000384403 102 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AL512633.1-201ENST00000399931 655 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 RNU2-54P-201ENST00000410299 190 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 IFNA11P-201ENST00000446352 526 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 RNU6-313P-201ENST00000516317 112 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 RNU6-548P-201ENST00000517083 115 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AC090897.2-201ENST00000581715 130 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 AC004467.1-201ENST00000615678 330 ntBASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL13A1Q5TAT6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 RNU1-62P-201ENST00000362599 164 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.75-201ENST00000362927 97 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.101-201ENST00000363154 102 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 Y_RNA.357-201ENST00000365487 109 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 AC069285.2-201ENST00000440210 275 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 RPL30P12-201ENST00000474666 353 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 HMGB3P3-201ENST00000510526 400 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 RNU6-155P-201ENST00000516347 100 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 GTF3AP2-201ENST00000557014 266 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 AC005086.4-201ENST00000623065 213 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 AC091895.1-201ENST00000624494 256 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.17□□□□□ -1.74
COL13A1Q5TAT6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms