Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.58□□□□□ -2.16
CBX1P83916 AC002486.1-201ENST00000435098 391 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC112492.4-201ENST00000456549 352 ntBASIC1.58□□□□□ -2.16
CBX1P83916 RPL31P3-201ENST00000458430 332 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC010409.1-201ENST00000487382 476 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC104564.1-201ENST00000493028 407 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.58□□□□□ -2.16
CBX1P83916 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.58□□□□□ -2.16
CBX1P83916 RNU6-567P-201ENST00000516746 107 ntBASIC1.58□□□□□ -2.16
CBX1P83916 SUB1P4-201ENST00000566062 339 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.58□□□□□ -2.16
CBX1P83916 MIR5583-1-201ENST00000580941 59 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AP001836.1-201ENST00000604675 523 ntBASIC1.58□□□□□ -2.16
CBX1P83916 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
CBX1P83916 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC073114.1-201ENST00000612027 490 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AC136475.10-201ENST00000620253 385 ntBASIC1.58□□□□□ -2.16
CBX1P83916 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CBX1P83916 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CBX1P83916 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
CBX1P83916 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
CBX1P83916 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
CBX1P83916 Y_RNA.159-201ENST00000363674 87 ntBASIC1.57□□□□□ -2.16
CBX1P83916 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
CBX1P83916 RNU2-41P-201ENST00000410991 178 ntBASIC1.57□□□□□ -2.16
CBX1P83916 SNRPEP8-201ENST00000442866 260 ntBASIC1.57□□□□□ -2.16
CBX1P83916 RNU7-63P-201ENST00000459054 62 ntBASIC1.57□□□□□ -2.16
CBX1P83916 FAM206BP-201ENST00000510179 541 ntBASIC1.57□□□□□ -2.16
CBX1P83916 AC091874.1-201ENST00000511402 339 ntBASIC1.57□□□□□ -2.16
CBX1P83916 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.57□□□□□ -2.16
CBX1P83916 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
CBX1P83916 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.57□□□□□ -2.16
CBX1P83916 AC021231.3-201ENST00000558497 370 ntBASIC1.57□□□□□ -2.16
CBX1P83916 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
CBX1P83916 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.57□□□□□ -2.16
CBX1P83916 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.57□□□□□ -2.16
CBX1P83916 Z98751.3-201ENST00000604447 521 ntBASIC1.57□□□□□ -2.16
CBX1P83916 AC016925.2-201ENST00000605108 242 ntBASIC1.57□□□□□ -2.16
CBX1P83916 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.57□□□□□ -2.16
CBX1P83916 AC022513.1-201ENST00000624512 117 ntBASIC1.57□□□□□ -2.16
CBX1P83916 AC005609.4-201ENST00000625071 447 ntBASIC1.57□□□□□ -2.16
CBX1P83916 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CBX1P83916 SNORA32.2-201ENST00000384049 122 ntBASIC1.56□□□□□ -2.16
CBX1P83916 RNU6-378P-201ENST00000384324 107 ntBASIC1.56□□□□□ -2.16
CBX1P83916 RNU6-348P-201ENST00000384386 107 ntBASIC1.56□□□□□ -2.16
CBX1P83916 MTCYBP8-201ENST00000422855 651 ntBASIC1.56□□□□□ -2.16
CBX1P83916 AC139712.2-201ENST00000424302 339 ntBASIC1.56□□□□□ -2.16
CBX1P83916 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.56□□□□□ -2.16
CBX1P83916 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 AC008628.2-201ENST00000502605 298 ntBASIC1.56□□□□□ -2.16
CBX1P83916 ARL2BPP4-201ENST00000506854 471 ntBASIC1.56□□□□□ -2.16
CBX1P83916 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 AC010493.1-201ENST00000513479 292 ntBASIC1.56□□□□□ -2.16
CBX1P83916 EIF4A1P12-201ENST00000551910 141 ntBASIC1.56□□□□□ -2.16
CBX1P83916 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 AL160236.1-201ENST00000556317 195 ntBASIC1.56□□□□□ -2.16
CBX1P83916 AC008269.2-201ENST00000561915 1105 ntBASIC1.56□□□□□ -2.16
CBX1P83916 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 CYP4A27P-201ENST00000567218 190 ntBASIC1.56□□□□□ -2.16
CBX1P83916 MIR4528-201ENST00000577763 90 ntBASIC1.56□□□□□ -2.16
CBX1P83916 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
CBX1P83916 AL450472.1-202ENST00000637286 180 ntBASIC1.56□□□□□ -2.16
CBX1P83916 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.56□□□□□ -2.16
CBX1P83916 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
CBX1P83916 RNU6-996P-201ENST00000365438 107 ntBASIC1.55□□□□□ -2.16
CBX1P83916 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
CBX1P83916 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.55□□□□□ -2.16
CBX1P83916 OOSP1P1-201ENST00000423265 274 ntBASIC1.55□□□□□ -2.16
CBX1P83916 HMGB1P18-201ENST00000438801 619 ntBASIC1.55□□□□□ -2.16
CBX1P83916 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.55□□□□□ -2.16
CBX1P83916 USP9YP29-201ENST00000445112 563 ntBASIC1.55□□□□□ -2.16
CBX1P83916 RNU7-180P-201ENST00000459240 63 ntBASIC1.55□□□□□ -2.16
CBX1P83916 AC097473.1-201ENST00000508142 408 ntBASIC1.55□□□□□ -2.16
CBX1P83916 RNU5F-4P-201ENST00000516581 114 ntBASIC1.55□□□□□ -2.16
CBX1P83916 Y_RNA.695-201ENST00000516715 107 ntBASIC1.55□□□□□ -2.16
CBX1P83916 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.55□□□□□ -2.16
CBX1P83916 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.55□□□□□ -2.16
CBX1P83916 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.55□□□□□ -2.16
CBX1P83916 MIR5094-201ENST00000578766 85 ntBASIC1.55□□□□□ -2.16
CBX1P83916 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
CBX1P83916 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
CBX1P83916 AC121247.2-201ENST00000604776 136 ntBASIC1.55□□□□□ -2.16
CBX1P83916 AC087752.4-201ENST00000605911 462 ntBASIC1.55□□□□□ -2.16
CBX1P83916 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
CBX1P83916 AP000770.2-201ENST00000623694 100 ntBASIC1.55□□□□□ -2.16
CBX1P83916 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.55□□□□□ -2.16
CBX1P83916 MTND5P9-201ENST00000503854 1755 ntBASIC1.54□□□□□ -2.16
CBX1P83916 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CBX1P83916 MIR340-201ENST00000362125 95 ntBASIC1.54□□□□□ -2.16
CBX1P83916 RNU6-338P-201ENST00000383888 105 ntBASIC1.54□□□□□ -2.16
CBX1P83916 RNU5A-6P-201ENST00000384136 116 ntBASIC1.54□□□□□ -2.16
CBX1P83916 SNORA36A-201ENST00000384221 132 ntBASIC1.54□□□□□ -2.16
CBX1P83916 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CBX1P83916 RNU6-1106P-201ENST00000390845 107 ntBASIC1.54□□□□□ -2.16
CBX1P83916 AP000275.1-201ENST00000411943 390 ntBASIC1.54□□□□□ -2.16
CBX1P83916 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.54□□□□□ -2.16
CBX1P83916 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.54□□□□□ -2.16
CBX1P83916 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
CBX1P83916 RNU7-14P-201ENST00000459331 62 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms