Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SNORA70F-201ENST00000384142 135 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RNU6-80P-201ENST00000384195 107 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RNU6-198P-201ENST00000384258 104 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 MT-TT-201ENST00000387460 66 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RNA5SP397-201ENST00000391323 118 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 SDHCP2-201ENST00000398565 501 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN1P35523 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN1P35523 RPL23AP58-201ENST00000440453 469 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RPL23AP93-201ENST00000440847 484 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 AC010099.1-201ENST00000455434 375 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RN7SL481P-201ENST00000477764 299 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RPL31P61-201ENST00000496160 376 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 Y_RNA.686-201ENST00000516548 134 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 MIR4724-201ENST00000579485 89 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 LARP7P3-201ENST00000579888 337 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 MIR5688-201ENST00000580619 83 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 AC011603.4-201ENST00000611325 277 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCN1P35523 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN1P35523 AC069528.2-201ENST00000624849 1991 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLCN1P35523 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN1P35523 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN1P35523 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLCN1P35523 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN1P35523 snoU2_19.1-201ENST00000362361 80 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 SNORD113.2-201ENST00000364166 89 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 Y_RNA.229-201ENST00000364347 113 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 SNORA67.2-201ENST00000384300 149 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 SNORA37-201ENST00000384504 129 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 MIR548B-201ENST00000385247 97 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 SNORA48.5-201ENST00000391143 135 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 AL159169.1-201ENST00000421119 127 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 AL691449.1-201ENST00000426570 421 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN1P35523 AC091390.1-201ENST00000433904 331 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCN1P35523 RNU7-23P-201ENST00000459465 62 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 TOMM20P2-201ENST00000540082 421 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 AC025754.2-201ENST00000606491 432 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 RNU1-30P-201ENST00000606575 163 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN1P35523 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCN1P35523 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCN1P35523 AC026241.1-201ENST00000517873 2142 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 AL136164.4-201ENST00000625013 2135 ntBASIC4.82□□□□□ -1.64
CLCN1P35523 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN1P35523 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN1P35523 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN1P35523 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN1P35523 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN1P35523 MAPK10-263ENST00000641052 4307 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN1P35523 RNU6-1325P-201ENST00000364905 105 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN1P35523 AL606845.1-201ENST00000404881 255 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 RNA5SP239-201ENST00000410218 129 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 AL445584.1-201ENST00000431451 330 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 HSPE1P21-201ENST00000438283 308 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 AC012671.1-201ENST00000451912 203 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 AC112771.1-201ENST00000463581 102 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN1P35523 AP001781.1-201ENST00000530977 207 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 MIR4270-201ENST00000581799 70 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 MIR6891-201ENST00000618788 93 ntBASIC4.81□□□□□ -1.64
CLCN1P35523 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN1P35523 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLCN1P35523 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN1P35523 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN1P35523 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN1P35523 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN1P35523 RNU6-1305P-201ENST00000364353 104 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 Y_RNA.361-201ENST00000365515 120 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLCN1P35523 RNU6-144P-201ENST00000383951 107 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 RNU1-57P-201ENST00000384491 166 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 RNU6-1228P-201ENST00000391014 107 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN1P35523 AC099778.2-201ENST00000610904 211 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 MIR6780A-201ENST00000615089 68 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 MIR7703-201ENST00000620784 77 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 AL354798.1-201ENST00000622505 329 ntBASIC4.8□□□□□ -1.64
CLCN1P35523 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN1P35523 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN1P35523 AC110774.1-201ENST00000623567 2018 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCN1P35523 RNU6-728P-201ENST00000365375 104 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 MIR3065-201ENST00000390137 79 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 RNU6-750P-201ENST00000390946 107 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 SNORA12-201ENST00000391162 147 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCN1P35523 HSPE1P26-201ENST00000405341 275 ntBASIC4.79□□□□□ -1.64
CLCN1P35523 TPT1P12-201ENST00000448968 492 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms