Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN4P29074 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN4P29074 SNORD60.2-201ENST00000516883 86 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AP000763.2-201ENST00000540641 163 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN4P29074 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN4P29074 MIR3136-201ENST00000583498 78 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC092747.3-201ENST00000603769 301 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC092807.2-201ENST00000609367 243 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC097372.5-201ENST00000623665 376 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN4P29074 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
PTPN4P29074 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
PTPN4P29074 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTPN4P29074 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PTPN4P29074 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.97□□□□□ -2.09
PTPN4P29074 CENPCP1-201ENST00000533085 2578 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 Y_RNA.9-201ENST00000362354 101 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 Y_RNA.38-201ENST00000362617 102 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 RNU6-451P-201ENST00000362921 107 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 Y_RNA.167-201ENST00000363735 109 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 RNY3P3-201ENST00000363816 102 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 Y_RNA.231-201ENST00000364358 102 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 AL117339.3-201ENST00000418733 162 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 MTCO1P20-201ENST00000425366 358 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN4P29074 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.97□□□□□ -2.09
PTPN4P29074 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN4P29074 RNU6-1208P-201ENST00000459588 107 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 RPL30P12-201ENST00000474666 353 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 AC109635.3-201ENST00000529536 185 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 AC022616.8-201ENST00000533569 253 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN4P29074 RNU6-85P-201ENST00000605989 107 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 DISC2.1-201ENST00000612827 205 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN4P29074 U4.5-201ENST00000617137 123 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 OR4G1P-203ENST00000641984 1631 ntBASIC1.97□□□□□ -2.09
PTPN4P29074 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PTPN4P29074 AC233981.2-201ENST00000611524 1614 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 Y_RNA.40-201ENST00000362645 93 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-428P-201ENST00000362942 107 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNY4P14-201ENST00000363656 96 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-522P-201ENST00000364497 107 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-1141P-201ENST00000364520 107 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-336P-201ENST00000364891 107 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 Y_RNA.402-201ENST00000383972 102 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 MIR544A-201ENST00000384855 91 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTPN4P29074 AL591034.2-201ENST00000402839 359 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU2-32P-201ENST00000411193 191 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 MTCO1P21-201ENST00000416634 589 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 ARL5AP1-201ENST00000418991 388 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN4P29074 RNU7-138P-201ENST00000459479 64 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-1069P-201ENST00000516612 133 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-548P-201ENST00000517083 115 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN4P29074 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN4P29074 AC010525.2-201ENST00000590920 195 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN4P29074 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNU6-89P-201ENST00000606519 100 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 AC004492.1-201ENST00000607036 742 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PTPN4P29074 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
PTPN4P29074 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RNU6-827P-201ENST00000365553 106 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RNU6-1032P-201ENST00000384100 107 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 Y_RNA.450-201ENST00000384198 113 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RNU6-1274P-201ENST00000384557 107 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RPS29P13-201ENST00000402041 169 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.95□□□□□ -2.1
PTPN4P29074 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN4P29074 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN4P29074 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN4P29074 AL031274.1-201ENST00000450334 232 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN4P29074 AC132942.1-201ENST00000486753 483 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC018868.1-201ENST00000491307 315 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.95□□□□□ -2.1
PTPN4P29074 RNU6-295P-201ENST00000516901 104 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 RNU6-667P-201ENST00000517186 102 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN4P29074 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN4P29074 AC007375.1-201ENST00000554513 578 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.95□□□□□ -2.1
PTPN4P29074 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
PTPN4P29074 AC068790.6-201ENST00000602558 258 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms