Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCD1O75127 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCD1O75127 PHBP14-201ENST00000512887 367 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 Y_RNA.679-201ENST00000516416 91 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 RNU6-567P-201ENST00000516746 107 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 CKS1BP7-201ENST00000522230 235 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 HIGD1AP1-201ENST00000550979 275 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 HMGN2P15-201ENST00000585707 270 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCD1O75127 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PTCD1O75127 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD1O75127 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTCD1O75127 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD1O75127 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCD1O75127 AC000123.3-201ENST00000624029 4975 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTCD1O75127 AC092268.1-201ENST00000342691 405 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 RNU6-137P-201ENST00000363680 108 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 RNU6-20P-201ENST00000384106 107 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 MIR329-1-201ENST00000385028 80 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 U3.19-201ENST00000390893 196 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 snoU13.28-201ENST00000459235 104 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 AC117440.1-201ENST00000474107 571 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 RPL26P26-201ENST00000480251 434 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCD1O75127 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCD1O75127 RNU1-61P-201ENST00000516107 151 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 RN7SKP209-201ENST00000516888 304 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCD1O75127 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD1O75127 MIR3609-201ENST00000582661 80 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 AC015813.4-201ENST00000610469 179 ntBASIC4.49□□□□□ -1.69
PTCD1O75127 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCD1O75127 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.49□□□□□ -1.69
PTCD1O75127 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
PTCD1O75127 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD1O75127 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCD1O75127 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCD1O75127 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 SNORA25.1-201ENST00000362326 128 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 RNA5SP374-201ENST00000362939 125 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 Y_RNA.343-201ENST00000365354 112 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 Y_RNA.435-201ENST00000384095 112 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 AL591034.1-201ENST00000407447 340 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCD1O75127 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCD1O75127 AL358075.3-201ENST00000426289 226 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 HMGN2P16-201ENST00000456802 261 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCD1O75127 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCD1O75127 RPL21P9-201ENST00000556149 474 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD1O75127 AC006504.1-201ENST00000562493 3666 ntBASIC4.48□□□□□ -1.69
PTCD1O75127 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 AF117829.1-206ENST00000621883 3802 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 RNU6-961P-201ENST00000363893 105 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 Y_RNA.446-201ENST00000384178 104 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 RNU6-514P-201ENST00000384208 107 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 Y_RNA.488-201ENST00000384403 102 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 RNU6-1289P-201ENST00000384431 106 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PTCD1O75127 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCD1O75127 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 RPL23AP82-202ENST00000427528 469 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCD1O75127 IFNA11P-201ENST00000446352 526 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 Z75741.1-201ENST00000446793 314 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 AC009237.7-201ENST00000447357 229 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 AC091959.1-201ENST00000495857 238 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 SNORA40.9-201ENST00000515895 93 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 RNU6-919P-201ENST00000516731 104 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 AK6P2-201ENST00000549020 471 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 MIR5680-201ENST00000577577 84 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 AC048347.1-201ENST00000624621 427 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCD1O75127 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCD1O75127 AC073073.2-201ENST00000609827 2578 ntBASIC4.47□□□□□ -1.69
PTCD1O75127 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCD1O75127 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD1O75127 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.46□□□□□ -1.69
PTCD1O75127 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTCD1O75127 RNU6-873P-201ENST00000363833 107 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 Y_RNA.215-201ENST00000364204 112 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 Y_RNA.218-201ENST00000364218 104 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms