Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 AC112907.2-201ENST00000448639 330 ntBASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 ZNF444P1-201ENST00000559497 298 ntBASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G3Q9Y6M4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G3Q9Y6M4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 VENTXP5-201ENST00000523979 775 ntBASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 HYMAI.1-201ENST00000620949 238 ntBASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1G3Q9Y6M4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1G3Q9Y6M4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 KRT18P56-201ENST00000507275 550 ntBASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms