Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 TSPY20P-201ENST00000450910 630 ntBASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 WIZP1-201ENST00000531444 2299 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 KRT16P1-201ENST00000399124 1418 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 AC091390.4-202ENST00000476426 537 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 RARRES2P10-201ENST00000564312 460 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 AF186192.3-201ENST00000583427 947 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 ITM2C-210ENST00000620962 501 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 AL359736.2-201ENST00000621992 437 ntBASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.48■■□□□ 1.19
CYP46A1Q9Y6A2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 RCC2P6-201ENST00000526625 1557 ntBASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 KRT18P29-201ENST00000397031 1267 ntBASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 FAM197Y4-202ENST00000622692 608 ntBASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CR392000.1-201ENST00000624770 1228 ntBASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CYP46A1Q9Y6A2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 PRSS44-201ENST00000515154 1146 ntBASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.46■■□□□ 1.19
CYP46A1Q9Y6A2 ANO7L1-203ENST00000602586 1720 ntBASIC22.45■■□□□ 1.19
CYP46A1Q9Y6A2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.45■■□□□ 1.19
CYP46A1Q9Y6A2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
CYP46A1Q9Y6A2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 AC004951.3-201ENST00000418645 1148 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms