Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 AL049812.1-201ENST00000432563 2267 ntBASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 KRT18P57-201ENST00000443599 1254 ntBASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 AC145285.6-201ENST00000604632 637 ntBASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI2Q9Y5P3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 KRT8P9-201ENST00000558927 1449 ntBASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RAI2Q9Y5P3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI2Q9Y5P3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI2Q9Y5P3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms