Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LIN28AP1-201ENST00000429574 405 ntBASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 AL031985.4-201ENST00000642138 673 ntBASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 IRX1P1-201ENST00000438849 1838 ntBASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 Z85996.1-201ENST00000494644 937 ntBASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 KRT8P41-201ENST00000533985 1514 ntBASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB1Q9Y5F3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 AC004980.1-204ENST00000429707 299 ntBASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ECEL1P2-202ENST00000465689 757 ntBASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB1Q9Y5F3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms